The 2.0 version of rSNPBase

Variant report

Variant rs9545078
Chromosome Location chr13:79913351-79913352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79882400-79914400 Weak transcription Rectal Smooth Muscle rectum
2 chr13:79882400-79925000 Weak transcription HSMMtube muscle
3 chr13:79886600-79950200 Weak transcription Fetal Brain Male brain
4 chr13:79887200-79946600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr13:79888000-79942800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr13:79888200-79947000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr13:79888400-79947000 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr13:79889800-79916200 Weak transcription Fetal Heart heart
9 chr13:79891600-79946800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr13:79891600-79947000 Strong transcription Primary monocytes fromperipheralblood blood
11 chr13:79891600-79947000 Strong transcription Dnd41 blood
12 chr13:79891800-79929200 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr13:79891800-79935800 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr13:79892800-79928200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr13:79893200-79957800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr13:79894200-79940200 Weak transcription Small Intestine intestine
17 chr13:79894400-79950200 Weak transcription Stomach Mucosa stomach
18 chr13:79898200-79939200 Weak transcription Fetal Stomach stomach
19 chr13:79898600-79941200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr13:79899000-79946400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr13:79899200-79921200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr13:79900000-79921200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr13:79900200-79933200 Weak transcription Psoas Muscle Psoas
24 chr13:79901400-79939200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr13:79902800-79919800 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr13:79902800-79922200 Strong transcription Primary B cells from peripheral blood blood
27 chr13:79903000-79919600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr13:79903400-79919800 Strong transcription HSMM muscle
29 chr13:79903400-79921000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr13:79903400-79923200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr13:79903600-79919600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr13:79903600-79919800 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr13:79903600-79921200 Strong transcription Fetal Thymus thymus
34 chr13:79903600-79921600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr13:79904000-79914600 Strong transcription Primary hematopoietic stem cells blood
36 chr13:79904000-79920400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr13:79904000-79928600 Weak transcription Right Ventricle heart
38 chr13:79904200-79920000 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr13:79904400-79919400 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr13:79904400-79921800 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr13:79904600-79918000 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr13:79905000-79920000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr13:79905200-79913600 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr13:79905200-79914000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr13:79905200-79916600 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr13:79905200-79928600 Weak transcription Brain Cingulate Gyrus brain
47 chr13:79906200-79918800 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr13:79906200-79939400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr13:79906800-79918800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr13:79907200-79919600 Strong transcription HUVEC blood vessel

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Last update: Aug 31, 2015