The 2.0 version of rSNPBase

Variant report

Variant rs9545073
Chromosome Location chr13:79909007-79909008
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79882200-79909800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr13:79882400-79911200 Weak transcription Left Ventricle heart
3 chr13:79882400-79911200 Weak transcription Ovary ovary
4 chr13:79882400-79914400 Weak transcription Rectal Smooth Muscle rectum
5 chr13:79882400-79925000 Weak transcription HSMMtube muscle
6 chr13:79886400-79911200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr13:79886600-79950200 Weak transcription Fetal Brain Male brain
8 chr13:79887200-79946600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr13:79888000-79942800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr13:79888200-79947000 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr13:79888400-79947000 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr13:79889400-79909800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr13:79889800-79909800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr13:79889800-79916200 Weak transcription Fetal Heart heart
15 chr13:79891400-79911200 Weak transcription Esophagus oesophagus
16 chr13:79891600-79911200 Weak transcription H9 Cell Line embryonic stem cell
17 chr13:79891600-79946800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr13:79891600-79947000 Strong transcription Primary monocytes fromperipheralblood blood
19 chr13:79891600-79947000 Strong transcription Dnd41 blood
20 chr13:79891800-79929200 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr13:79891800-79935800 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr13:79892800-79928200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr13:79893200-79957800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr13:79893600-79909400 Weak transcription Placenta Amnion Placenta Amnion
25 chr13:79894200-79910000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr13:79894200-79940200 Weak transcription Small Intestine intestine
27 chr13:79894400-79909200 Weak transcription Brain Germinal Matrix brain
28 chr13:79894400-79910600 Weak transcription Thymus Thymus
29 chr13:79894400-79950200 Weak transcription Stomach Mucosa stomach
30 chr13:79895200-79909400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr13:79896000-79910600 Weak transcription Aorta Aorta
32 chr13:79896200-79912600 Strong transcription Hela-S3 cervix
33 chr13:79897800-79911200 Weak transcription Pancreas Pancrea
34 chr13:79898200-79911200 Weak transcription Lung lung
35 chr13:79898200-79939200 Weak transcription Fetal Stomach stomach
36 chr13:79898600-79941200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr13:79899000-79946400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr13:79899200-79921200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr13:79899800-79911200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr13:79900000-79921200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr13:79900200-79933200 Weak transcription Psoas Muscle Psoas
42 chr13:79900800-79909800 Weak transcription A549 lung
43 chr13:79901400-79939200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr13:79901800-79909400 Weak transcription HMEC breast
45 chr13:79902800-79919800 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr13:79902800-79922200 Strong transcription Primary B cells from peripheral blood blood
47 chr13:79903000-79911200 Strong transcription Primary B cells from cord blood blood
48 chr13:79903000-79919600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr13:79903400-79919800 Strong transcription HSMM muscle
50 chr13:79903400-79921000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015