Variant report
| Variant | rs57097362 |
|---|---|
| Chromosome Location | chr5:36414650-36414651 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:7)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:7 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr5:36414596..36415348-chr5:36693243..36693949,3 | K562 | blood: | |
| 2 | chr5:36414583..36415587-chr5:36506983..36508090,7 | K562 | blood: | |
| 3 | chr5:36073820..36074324-chr5:36414533..36415465,2 | MCF-7 | breast: | |
| 4 | chr5:36414601..36415558-chr5:36689948..36691438,6 | MCF-7 | breast: | |
| 5 | chr5:36414523..36415507-chr5:36690444..36691337,4 | MCF-7 | breast: | |
| 6 | chr5:36414161..36415558-chr5:36507119..36508035,4 | MCF-7 | breast: | |
| 7 | chr5:36411850..36414736-chr5:36440428..36442973,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs10053299 | 1.00[EUR][1000 genomes] |
| rs10054009 | 1.00[EUR][1000 genomes] |
| rs10056349 | 1.00[EUR][1000 genomes] |
| rs10056352 | 1.00[EUR][1000 genomes] |
| rs10056466 | 1.00[EUR][1000 genomes] |
| rs10058111 | 1.00[EUR][1000 genomes] |
| rs10058115 | 1.00[EUR][1000 genomes] |
| rs10058314 | 1.00[EUR][1000 genomes] |
| rs10058422 | 1.00[EUR][1000 genomes] |
| rs10058564 | 1.00[EUR][1000 genomes] |
| rs10061999 | 1.00[EUR][1000 genomes] |
| rs10073164 | 1.00[EUR][1000 genomes] |
| rs10073279 | 1.00[EUR][1000 genomes] |
| rs10077206 | 1.00[EUR][1000 genomes] |
| rs10085047 | 1.00[EUR][1000 genomes] |
| rs10085102 | 1.00[EUR][1000 genomes] |
| rs11954566 | 1.00[EUR][1000 genomes] |
| rs13354988 | 1.00[EUR][1000 genomes] |
| rs28376702 | 1.00[EUR][1000 genomes] |
| rs28479598 | 1.00[EUR][1000 genomes] |
| rs28505610 | 1.00[EUR][1000 genomes] |
| rs28523559 | 1.00[EUR][1000 genomes] |
| rs28647761 | 1.00[EUR][1000 genomes] |
| rs56288606 | 1.00[EUR][1000 genomes] |
| rs57336573 | 1.00[EUR][1000 genomes] |
| rs58556892 | 1.00[EUR][1000 genomes] |
| rs59457338 | 1.00[EUR][1000 genomes] |
| rs60856949 | 1.00[EUR][1000 genomes] |
| rs61246645 | 1.00[EUR][1000 genomes] |
| rs61448540 | 1.00[EUR][1000 genomes] |
| rs6891700 | 1.00[EUR][1000 genomes] |
| rs73089650 | 1.00[EUR][1000 genomes] |
| rs73089652 | 1.00[EUR][1000 genomes] |
| rs73089653 | 1.00[EUR][1000 genomes] |
| rs73089661 | 1.00[EUR][1000 genomes] |
| rs73089667 | 1.00[EUR][1000 genomes] |
| rs73089669 | 1.00[EUR][1000 genomes] |
| rs73089699 | 1.00[EUR][1000 genomes] |
| rs73089701 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:36414600-36415600 | Enhancers | Colon Smooth Muscle | Colon |
