The 2.0 version of rSNPBase

Variant report

Variant rs57185319
Chromosome Location chr3:113698249-113698250
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113667800-113710800 Weak transcription Esophagus oesophagus
2 chr3:113668000-113699000 Weak transcription Stomach Mucosa stomach
3 chr3:113668400-113724200 Weak transcription Rectal Smooth Muscle rectum
4 chr3:113673000-113700800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr3:113673400-113704400 Weak transcription Brain Hippocampus Middle brain
6 chr3:113673400-113761000 Weak transcription Brain Cingulate Gyrus brain
7 chr3:113674000-113743800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr3:113676400-113723400 Weak transcription Brain Substantia Nigra brain
9 chr3:113678000-113724400 Weak transcription Pancreas Pancrea
10 chr3:113678000-113731400 Weak transcription Gastric stomach
11 chr3:113682800-113707200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:113683000-113723600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr3:113688600-113699400 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr3:113692600-113723400 Weak transcription Fetal Kidney kidney
15 chr3:113692800-113698800 Weak transcription Liver Liver
16 chr3:113692800-113711000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr3:113693200-113703000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr3:113693200-113723800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:113693200-113724200 Weak transcription A549 lung
20 chr3:113693400-113700200 Strong transcription Primary B cells from cord blood blood
21 chr3:113693400-113724000 Weak transcription Colonic Mucosa Colon
22 chr3:113693600-113698800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:113693600-113699000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr3:113693600-113699600 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr3:113693600-113705200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr3:113693600-113705600 Weak transcription Fetal Intestine Small intestine
27 chr3:113693600-113723200 Weak transcription Fetal Stomach stomach
28 chr3:113693600-113724600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr3:113693600-113731200 Weak transcription Spleen Spleen
30 chr3:113693800-113699800 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr3:113693800-113704200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr3:113693800-113704600 Weak transcription Thymus Thymus
33 chr3:113693800-113731400 Weak transcription Fetal Brain Female brain
34 chr3:113694000-113704000 Weak transcription Primary hematopoietic stem cells blood
35 chr3:113694000-113704000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr3:113694000-113729800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr3:113694200-113705400 Weak transcription Fetal Lung lung
38 chr3:113694400-113701200 Weak transcription Fetal Muscle Trunk muscle
39 chr3:113694400-113705400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr3:113694400-113723400 Weak transcription Colon Smooth Muscle Colon
41 chr3:113694800-113726000 Weak transcription Fetal Brain Male brain
42 chr3:113695400-113725400 Weak transcription NHDF-Ad bronchial
43 chr3:113695600-113699200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr3:113695600-113699600 Strong transcription Adipose Nuclei Adipose
45 chr3:113695600-113700400 Strong transcription Primary T cells from cord blood blood
46 chr3:113695800-113698800 Strong transcription Sigmoid Colon Sigmoid Colon
47 chr3:113695800-113699600 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr3:113695800-113704000 Weak transcription HMEC breast
49 chr3:113696000-113699400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:113696000-113699600 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015