The 2.0 version of rSNPBase

Variant report

Variant rs72956606
Chromosome Location chr3:113706456-113706457
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113667800-113710800 Weak transcription Esophagus oesophagus
2 chr3:113668400-113724200 Weak transcription Rectal Smooth Muscle rectum
3 chr3:113673400-113761000 Weak transcription Brain Cingulate Gyrus brain
4 chr3:113674000-113743800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr3:113676400-113723400 Weak transcription Brain Substantia Nigra brain
6 chr3:113678000-113724400 Weak transcription Pancreas Pancrea
7 chr3:113678000-113731400 Weak transcription Gastric stomach
8 chr3:113682800-113707200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr3:113683000-113723600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr3:113692600-113723400 Weak transcription Fetal Kidney kidney
11 chr3:113692800-113711000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr3:113693200-113723800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr3:113693200-113724200 Weak transcription A549 lung
14 chr3:113693400-113724000 Weak transcription Colonic Mucosa Colon
15 chr3:113693600-113723200 Weak transcription Fetal Stomach stomach
16 chr3:113693600-113724600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr3:113693600-113731200 Weak transcription Spleen Spleen
18 chr3:113693800-113731400 Weak transcription Fetal Brain Female brain
19 chr3:113694000-113729800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr3:113694400-113723400 Weak transcription Colon Smooth Muscle Colon
21 chr3:113694800-113726000 Weak transcription Fetal Brain Male brain
22 chr3:113695400-113725400 Weak transcription NHDF-Ad bronchial
23 chr3:113696200-113723600 Weak transcription HSMMtube muscle
24 chr3:113697000-113722200 Weak transcription Placenta Amnion Placenta Amnion
25 chr3:113697200-113723400 Weak transcription Lung lung
26 chr3:113697200-113724200 Weak transcription Right Ventricle heart
27 chr3:113697600-113726400 Weak transcription Brain Germinal Matrix brain
28 chr3:113698000-113718000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:113698200-113711000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr3:113698200-113717400 Weak transcription Brain Anterior Caudate brain
31 chr3:113698200-113722800 Weak transcription Fetal Muscle Leg muscle
32 chr3:113698400-113723200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:113698800-113711600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr3:113699200-113724000 Weak transcription Liver Liver
35 chr3:113699400-113723800 Weak transcription Brain Angular Gyrus brain
36 chr3:113699600-113722200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr3:113699600-113722800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:113699600-113723400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr3:113699600-113724400 Weak transcription Duodenum Mucosa Duodenum
40 chr3:113699600-113753200 Weak transcription Primary T cells fromperipheralblood blood
41 chr3:113700000-113717600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:113701400-113724200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:113704200-113711600 Weak transcription Adipose Nuclei Adipose
44 chr3:113704400-113707400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr3:113704400-113724600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr3:113704600-113706800 Strong transcription Ovary ovary
47 chr3:113704800-113707400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr3:113704800-113721000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr3:113704800-113722800 Weak transcription Left Ventricle heart
50 chr3:113705000-113723400 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015