Variant report
| Variant | rs57287621 |
|---|---|
| Chromosome Location | chr6:54878249-54878250 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:49)
| rs_ID | r2[population] |
|---|---|
| rs10485135 | 1.00[EUR][1000 genomes] |
| rs10948865 | 1.00[EUR][1000 genomes] |
| rs10948871 | 1.00[EUR][1000 genomes] |
| rs11961881 | 1.00[EUR][1000 genomes] |
| rs11964483 | 1.00[EUR][1000 genomes] |
| rs16886234 | 1.00[EUR][1000 genomes] |
| rs16886244 | 1.00[EUR][1000 genomes] |
| rs16886248 | 1.00[EUR][1000 genomes] |
| rs16886267 | 1.00[EUR][1000 genomes] |
| rs2062780 | 1.00[EUR][1000 genomes] |
| rs2062781 | 1.00[EUR][1000 genomes] |
| rs4327697 | 1.00[EUR][1000 genomes] |
| rs4428489 | 1.00[EUR][1000 genomes] |
| rs55801328 | 1.00[AMR][1000 genomes] |
| rs55954156 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs56272400 | 1.00[AMR][1000 genomes] |
| rs58495896 | 1.00[EUR][1000 genomes] |
| rs60013096 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs60517516 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61632434 | 1.00[EUR][1000 genomes] |
| rs6906651 | 1.00[EUR][1000 genomes] |
| rs6915116 | 1.00[EUR][1000 genomes] |
| rs6933855 | 1.00[EUR][1000 genomes] |
| rs73431481 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73432338 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73432360 | 1.00[EUR][1000 genomes] |
| rs73432383 | 1.00[EUR][1000 genomes] |
| rs73434410 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73446382 | 1.00[EUR][1000 genomes] |
| rs73742854 | 1.00[EUR][1000 genomes] |
| rs73742861 | 1.00[EUR][1000 genomes] |
| rs73742862 | 1.00[EUR][1000 genomes] |
| rs73742869 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73742883 | 1.00[AMR][1000 genomes] |
| rs7756856 | 1.00[EUR][1000 genomes] |
| rs9296772 | 1.00[EUR][1000 genomes] |
| rs9464150 | 1.00[EUR][1000 genomes] |
| rs9464164 | 1.00[EUR][1000 genomes] |
| rs9464165 | 1.00[EUR][1000 genomes] |
| rs9464168 | 1.00[EUR][1000 genomes] |
| rs9464169 | 1.00[EUR][1000 genomes] |
| rs9464170 | 1.00[EUR][1000 genomes] |
| rs9475070 | 1.00[EUR][1000 genomes] |
| rs9475071 | 1.00[EUR][1000 genomes] |
| rs9475074 | 1.00[EUR][1000 genomes] |
| rs9475076 | 1.00[EUR][1000 genomes] |
| rs9475080 | 1.00[EUR][1000 genomes] |
| rs9475084 | 1.00[EUR][1000 genomes] |
| rs9475086 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:54876800-54879000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 2 | chr6:54877000-54878400 | Weak transcription | Fetal Lung | lung |
| 3 | chr6:54877200-54881200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 4 | chr6:54877600-54878800 | Weak transcription | Fetal Brain Male | brain |
