The 2.0 version of rSNPBase

Variant report

Variant rs57427469
Chromosome Location chr10:21839201-21839202
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:21824600-21842600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr10:21824600-21864600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr10:21824600-21930400 Weak transcription Gastric stomach
4 chr10:21824800-21841800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr10:21824800-21852200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:21824800-21852200 Strong transcription Fetal Intestine Small intestine
7 chr10:21824800-21860200 Weak transcription Psoas Muscle Psoas
8 chr10:21825000-21844200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr10:21825000-21850000 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr10:21825200-21850600 Strong transcription Fetal Stomach stomach
11 chr10:21825200-21854800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr10:21825600-21842200 Strong transcription Cortex derived primary cultured neurospheres brain
13 chr10:21825600-21849800 Strong transcription Primary monocytes fromperipheralblood blood
14 chr10:21825600-21850000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr10:21825600-21857800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr10:21825800-21844400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr10:21825800-21856200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr10:21826200-21844200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr10:21826200-21850600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr10:21826800-21839400 Strong transcription Liver Liver
21 chr10:21826800-21844800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr10:21827200-21842600 Strong transcription Primary T cells fromperipheralblood blood
23 chr10:21827800-21839400 Strong transcription Fetal Lung lung
24 chr10:21827800-21842200 Strong transcription Osteobl bone
25 chr10:21827800-21850800 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr10:21828000-21851200 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr10:21828000-21856600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr10:21828400-21839600 Strong transcription Lung lung
29 chr10:21828400-21845200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr10:21831800-21839400 Weak transcription Right Ventricle heart
31 chr10:21832000-21856400 Weak transcription Colonic Mucosa Colon
32 chr10:21832000-21876400 Weak transcription Aorta Aorta
33 chr10:21832200-21848000 Weak transcription Esophagus oesophagus
34 chr10:21832800-21856200 Weak transcription Pancreas Pancrea
35 chr10:21833200-21840400 Weak transcription HSMMtube muscle
36 chr10:21833400-21840800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr10:21833400-21841800 Weak transcription Fetal Brain Male brain
38 chr10:21833400-21851200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr10:21833400-21856200 Weak transcription Small Intestine intestine
40 chr10:21833400-21856400 Weak transcription Colon Smooth Muscle Colon
41 chr10:21833600-21848000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr10:21833800-21841000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr10:21834400-21840800 Weak transcription Placenta Amnion Placenta Amnion
44 chr10:21834400-21847800 Weak transcription Brain Angular Gyrus brain
45 chr10:21834600-21840800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr10:21834600-21841600 Weak transcription HSMM muscle
47 chr10:21834800-21840400 Weak transcription H9 Cell Line embryonic stem cell
48 chr10:21834800-21840400 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr10:21834800-21841600 Weak transcription Rectal Smooth Muscle rectum
50 chr10:21834800-21843600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015