Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	22:33002359-33009462..22:33262063-33266567	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000185666	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs16990831	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs16990849	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16990857	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16990872	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1970783	0.89[ASN][1000 genomes]
rs2003815	0.89[ASN][1000 genomes]
rs2858743	0.85[ASN][1000 genomes]
rs28835002	0.89[ASN][1000 genomes]
rs5749472	0.99[ASN][1000 genomes]
rs5754167	0.89[ASN][1000 genomes]
rs5754171	1.00[ASN][1000 genomes]
rs5754172	1.00[ASN][1000 genomes]
rs5754174	0.96[ASN][1000 genomes]
rs58228617	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs58291507	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs58377860	0.97[ASN][1000 genomes]
rs58410126	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60207395	0.96[ASN][1000 genomes]
rs61110043	0.97[ASN][1000 genomes]
rs73154345	0.97[ASN][1000 genomes]
rs73154346	0.99[ASN][1000 genomes]
rs73154363	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73154365	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs762968	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1055541	chr22:33006967-33101138	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv2762119	chr22:33006967-33101150	Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33002600-33009800	Weak transcription	Fetal Kidney	kidney
2	chr22:33004000-33009400	Weak transcription	Spleen	Spleen
3	chr22:33004000-33011600	Weak transcription	Fetal Muscle Trunk	muscle
4	chr22:33004000-33011600	Weak transcription	Placenta	Placenta
5	chr22:33004000-33011800	Weak transcription	Left Ventricle	heart
6	chr22:33004000-33012600	Weak transcription	Fetal Lung	lung
7	chr22:33008800-33010600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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