Variant report

No.	Distal block	Cell Line	Cell type
1	chr22:32955430..32957746-chr22:33001702..33003810,2	MCF-7	breast:
2	chr22:33003267..33003823-chr22:33190420..33190977,2	MCF-7	breast:
3	chr22:33003266..33003815-chr22:33172113..33172653,2	MCF-7	breast:
4	22:33002359-33009462..22:33262063-33266567	Hela-S3	cervix:
5	chr22:32958813..32960558-chr22:33002769..33004900,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185666	Chromatin interaction

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16990849	0.84[CHB][hapmap];0.93[JPT][hapmap];0.88[ASN][1000 genomes]
rs1970783	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2003815	0.99[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2858743	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28835002	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs5749471	0.86[CHB][hapmap];0.94[JPT][hapmap]
rs5749472	0.89[ASN][1000 genomes]
rs5754167	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5754171	0.89[ASN][1000 genomes]
rs5754172	0.89[ASN][1000 genomes]
rs5754173	0.89[ASN][1000 genomes]
rs5754174	0.85[ASN][1000 genomes]
rs58377860	0.86[ASN][1000 genomes]
rs5998557	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs60207395	0.85[ASN][1000 genomes]
rs61110043	0.88[ASN][1000 genomes]
rs73154345	0.88[ASN][1000 genomes]
rs73154346	0.89[ASN][1000 genomes]
rs9621508	0.81[JPT][hapmap]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32998800-33004000	Enhancers	Placenta	Placenta
2	chr22:32999600-33004000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr22:33000200-33003400	Weak transcription	Fetal Muscle Trunk	muscle
4	chr22:33001200-33003800	Enhancers	Placenta Amnion	Placenta Amnion
5	chr22:33001600-33003400	Enhancers	Fetal Thymus	thymus
6	chr22:33001600-33003800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr22:33001600-33004000	Enhancers	Lung	lung
8	chr22:33001800-33003800	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr22:33001800-33004000	Enhancers	Spleen	Spleen
10	chr22:33002000-33003400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr22:33002000-33004000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr22:33002200-33004000	Enhancers	HepG2	liver
13	chr22:33002600-33009800	Weak transcription	Fetal Kidney	kidney
14	chr22:33003200-33003800	Weak transcription	Right Atrium	heart
15	chr22:33003200-33004000	Enhancers	Fetal Lung	lung
16	chr22:33003200-33004000	Enhancers	Fetal Muscle Leg	muscle
17	chr22:33003200-33004000	Enhancers	Left Ventricle	heart
18	chr22:33003200-33004400	Enhancers	Fetal Stomach	stomach
19	chr22:33003200-33004600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr22:33003200-33005000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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