The 2.0 version of rSNPBase

Variant report

Variant rs57946612
Chromosome Location chr9:73180734-73180735
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:73157800-73199800 Weak transcription Aorta Aorta
2 chr9:73170000-73189000 Weak transcription Muscle Satellite Cultured Cells --
3 chr9:73170200-73181200 Weak transcription Fetal Muscle Leg muscle
4 chr9:73170800-73188400 Weak transcription Right Atrium heart
5 chr9:73177200-73181400 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr9:73178000-73181200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:73178400-73181600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr9:73178400-73183600 Weak transcription Small Intestine intestine
9 chr9:73178600-73181600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr9:73178600-73184000 Weak transcription Colon Smooth Muscle Colon
11 chr9:73178800-73181200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr9:73178800-73181400 Enhancers Primary T cells fromperipheralblood blood
13 chr9:73178800-73181600 Weak transcription HSMMtube muscle
14 chr9:73178800-73181800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr9:73178800-73182000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr9:73179000-73181600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr9:73179000-73181800 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr9:73179200-73181400 Enhancers Primary T cells from cord blood blood
19 chr9:73179200-73181400 Enhancers Primary T helper cells fromperipheralblood blood
20 chr9:73179400-73181400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr9:73179400-73182200 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr9:73179600-73181000 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr9:73179600-73181400 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr9:73179600-73181400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr9:73179600-73181800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr9:73179600-73188800 Weak transcription Adipose Nuclei Adipose
27 chr9:73179600-73188800 Weak transcription Brain Anterior Caudate brain
28 chr9:73179800-73181800 Enhancers Primary T helper cells PMA-I stimulated --
29 chr9:73179800-73181800 Weak transcription Placenta Placenta
30 chr9:73179800-73181800 Weak transcription Osteobl bone
31 chr9:73179800-73183600 Weak transcription NHDF-Ad bronchial
32 chr9:73179800-73184000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr9:73179800-73186600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr9:73179800-73188800 Weak transcription Duodenum Mucosa Duodenum
35 chr9:73180000-73181000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr9:73180000-73181200 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr9:73180000-73181200 Weak transcription Pancreas Pancrea
38 chr9:73180000-73181600 Weak transcription H1 Cell Line embryonic stem cell
39 chr9:73180000-73181600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr9:73180000-73181600 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr9:73180000-73181600 Weak transcription Fetal Lung lung
42 chr9:73180000-73184200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr9:73180000-73189000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr9:73180200-73181600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr9:73180200-73181600 Weak transcription Psoas Muscle Psoas
46 chr9:73180200-73189000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr9:73180400-73182400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr9:73180600-73182000 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015