Variant report

Variant	rs58112950
Chromosome Location	chr4:81435701-81435702
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17004897	1.00[AMR][1000 genomes]
rs17004938	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17004949	1.00[AMR][1000 genomes]
rs17004951	1.00[AMR][1000 genomes]
rs1874335	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56062404	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57326646	1.00[AMR][1000 genomes]
rs60366641	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60660007	1.00[AMR][1000 genomes]
rs60770229	1.00[EUR][1000 genomes]
rs6811392	1.00[EUR][1000 genomes]
rs6813734	1.00[AMR][1000 genomes]
rs6834355	1.00[EUR][1000 genomes]
rs72873874	1.00[EUR][1000 genomes]
rs73829294	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73832425	1.00[AMR][1000 genomes]
rs73832427	1.00[AMR][1000 genomes]
rs73832428	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7665568	1.00[AMR][1000 genomes]
rs7669743	1.00[AMR][1000 genomes]
rs7690311	1.00[AMR][1000 genomes]
rs7699161	1.00[AMR][1000 genomes]
rs966860	1.00[AMR][1000 genomes]
rs966861	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013945	chr4:81410029-81454166	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81434800-81436000	Weak transcription	Fetal Lung	lung
2	chr4:81435600-81436600	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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