Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:137369548..137371096-chr7:137379761..137381577,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10227387	0.94[ASN][1000 genomes]
rs10268869	1.00[AMR][1000 genomes]
rs10269622	1.00[AMR][1000 genomes]
rs10270098	1.00[AMR][1000 genomes]
rs10273283	1.00[AMR][1000 genomes]
rs28419330	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs28633970	1.00[AMR][1000 genomes]
rs28735762	1.00[AMR][1000 genomes]
rs3778801	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3800625	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3800627	0.94[ASN][1000 genomes]
rs3800632	0.88[ASN][1000 genomes]
rs56076414	0.82[ASN][1000 genomes]
rs58290352	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs60053545	0.84[AFR][1000 genomes]
rs60207538	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6947666	0.94[ASN][1000 genomes]
rs73730092	0.84[AFR][1000 genomes]
rs73730095	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73730098	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73731004	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7458662	1.00[AMR][1000 genomes]
rs7459099	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv464731	chr7:137356651-137404781	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv608466	chr7:137356651-137404781	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137370800-137384600	Weak transcription	Fetal Brain Female	brain
2	chr7:137374000-137387400	Weak transcription	Aorta	Aorta
3	chr7:137375800-137382400	Enhancers	Muscle Satellite Cultured Cells	--
4	chr7:137379200-137382000	Enhancers	Osteobl	bone
5	chr7:137379200-137383800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr7:137379600-137381600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:137379800-137381600	Enhancers	HepG2	liver
8	chr7:137380200-137388000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr7:137380400-137381800	Enhancers	NHDF-Ad	bronchial
10	chr7:137380400-137382000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr7:137380600-137382000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr7:137381000-137382000	Weak transcription	HSMMtube	muscle
13	chr7:137381000-137385000	Weak transcription	Brain Substantia Nigra	brain
14	chr7:137381000-137388000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr7:137381200-137381800	Enhancers	HSMM	muscle
16	chr7:137381200-137385600	Weak transcription	Brain Hippocampus Middle	brain
17	chr7:137381400-137381800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr7:137381400-137382000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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