Variant report

Variant	rs58966508
Chromosome Location	chr8:126654500-126654501
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126610315..126613289-chr8:126653712..126655623,2	MCF-7	breast:
2	chr8:126440357..126445683-chr8:126653712..126658704,14	MCF-7	breast:
3	chr8:126440766..126445599-chr8:126653604..126662049,19	MCF-7	breast:
4	chr8:126446615..126448287-chr8:126653955..126655577,2	MCF-7	breast:
5	chr8:126648690..126650676-chr8:126653324..126654836,2	K562	blood:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rs_ID	r²[population]
rs10097356	1.00[EUR][1000 genomes]
rs10105848	1.00[EUR][1000 genomes]
rs10106819	1.00[EUR][1000 genomes]
rs10106935	1.00[EUR][1000 genomes]
rs10106950	1.00[EUR][1000 genomes]
rs10107935	1.00[EUR][1000 genomes]
rs10109000	1.00[EUR][1000 genomes]
rs10111309	1.00[EUR][1000 genomes]
rs13439074	1.00[EUR][1000 genomes]
rs28421051	1.00[EUR][1000 genomes]
rs28617180	1.00[EUR][1000 genomes]
rs28629877	1.00[EUR][1000 genomes]
rs28676821	1.00[EUR][1000 genomes]
rs6985650	1.00[EUR][1000 genomes]
rs7015483	1.00[EUR][1000 genomes]
rs71516796	1.00[EUR][1000 genomes]
rs7817929	1.00[EUR][1000 genomes]
rs7826972	1.00[EUR][1000 genomes]
rs7844941	1.00[EUR][1000 genomes]
rs7845326	1.00[EUR][1000 genomes]

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126649800-126655200	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr8:126649800-126656600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr8:126649800-126656600	Weak transcription	Stomach Mucosa	stomach
4	chr8:126649800-126660400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr8:126650000-126656200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr8:126650200-126655400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:126650400-126654800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr8:126650400-126656000	Weak transcription	Primary B cells from peripheral blood	blood
9	chr8:126650400-126656200	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr8:126650400-126656400	Weak transcription	Fetal Heart	heart
11	chr8:126650600-126655200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:126650800-126655600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr8:126650800-126656200	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr8:126650800-126656200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr8:126651000-126656200	Weak transcription	Primary B cells from cord blood	blood
16	chr8:126651000-126656400	Weak transcription	Small Intestine	intestine
17	chr8:126651000-126656400	Weak transcription	NHDF-Ad	bronchial
18	chr8:126651000-126656600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr8:126651200-126656200	Weak transcription	Left Ventricle	heart
20	chr8:126651200-126656400	Weak transcription	Lung	lung
21	chr8:126651400-126655800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr8:126651400-126656000	Weak transcription	Spleen	Spleen
23	chr8:126651400-126656600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr8:126651600-126656400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr8:126651800-126655800	Weak transcription	Hela-S3	cervix
26	chr8:126651800-126656000	Weak transcription	Primary neutrophils fromperipheralblood	blood
27	chr8:126652200-126656000	Weak transcription	HMEC	breast
28	chr8:126652200-126656200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr8:126652200-126656200	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr8:126652400-126657000	Enhancers	Placenta	Placenta
31	chr8:126653200-126654600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr8:126653200-126655400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr8:126653200-126656400	Enhancers	Liver	Liver
34	chr8:126653200-126656400	Weak transcription	Right Ventricle	heart
35	chr8:126653200-126657400	Enhancers	HUES6 Cell Line	embryonic stem cell
36	chr8:126653400-126654600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
37	chr8:126653400-126654600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr8:126653400-126654600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr8:126653400-126654600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr8:126653400-126654600	Enhancers	Brain Anterior Caudate	brain
41	chr8:126653400-126654600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
42	chr8:126653400-126654600	Enhancers	Brain Substantia Nigra	brain
43	chr8:126653400-126654600	Enhancers	Fetal Lung	lung
44	chr8:126653400-126654600	Enhancers	Fetal Muscle Trunk	muscle
45	chr8:126653400-126654600	Enhancers	Fetal Muscle Leg	muscle
46	chr8:126653400-126654600	Enhancers	Psoas Muscle	Psoas
47	chr8:126653400-126654600	Enhancers	Skeletal Muscle Male	skeletal muscle
48	chr8:126653400-126654800	Enhancers	Brain Hippocampus Middle	brain
49	chr8:126653400-126654800	Enhancers	Fetal Stomach	stomach
50	chr8:126653400-126655200	Enhancers	Skeletal Muscle Female	skeletal muscle

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