Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:57311859..57314470-chrX:57378365..57381187,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165591	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12559310	0.86[YRI][hapmap]
rs1431676	1.00[YRI][hapmap]
rs1583201	0.90[YRI][hapmap]
rs1586242	0.81[ASW][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap]
rs1594506	0.81[YRI][hapmap]
rs1821117	1.00[ASW][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs1835693	0.81[ASW][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap]
rs2116363	1.00[YRI][hapmap]
rs2499551	1.00[YRI][hapmap]
rs2516025	1.00[ASW][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs4418471	1.00[YRI][hapmap]
rs4826543	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs5914082	1.00[YRI][hapmap]
rs5914091	1.00[ASW][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs5914099	1.00[YRI][hapmap]
rs5914961	0.90[ASW][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.82[YRI][hapmap]
rs5914963	1.00[ASW][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs5914989	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs5915047	0.81[ASW][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap]
rs5960261	1.00[ASW][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs5960967	1.00[YRI][hapmap]
rs5960975	0.81[ASW][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap]
rs6612776	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:57375000-57384800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chrX:57375200-57379400	Weak transcription	Liver	Liver
3	chrX:57375200-57393000	Weak transcription	Pancreas	Pancrea

Quick Search: