The 2.0 version of rSNPBase

Variant report

Variant rs59180278
Chromosome Location chr6:110137981-110137982
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:110082000-110152600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr6:110090400-110149200 Weak transcription Fetal Intestine Large intestine
3 chr6:110108000-110140200 Weak transcription Fetal Brain Male brain
4 chr6:110112800-110145400 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr6:110115800-110144800 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:110115800-110146000 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr6:110115800-110155800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:110116000-110146000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:110116200-110152000 Weak transcription Colonic Mucosa Colon
10 chr6:110117400-110148200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:110117600-110138200 Weak transcription Fetal Muscle Leg muscle
12 chr6:110117600-110144800 Weak transcription Spleen Spleen
13 chr6:110117600-110152000 Weak transcription Fetal Muscle Trunk muscle
14 chr6:110117600-110155400 Weak transcription Rectal Smooth Muscle rectum
15 chr6:110117600-110159200 Weak transcription Pancreas Pancrea
16 chr6:110118800-110141600 Weak transcription Fetal Lung lung
17 chr6:110118800-110146400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:110118800-110149800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr6:110118800-110152400 Weak transcription Duodenum Mucosa Duodenum
20 chr6:110118800-110152400 Weak transcription Thymus Thymus
21 chr6:110119000-110145000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:110120800-110138400 Weak transcription Brain Germinal Matrix brain
23 chr6:110121200-110138000 Weak transcription HSMM muscle
24 chr6:110121200-110148800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:110121200-110150600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:110121400-110145000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr6:110121400-110147600 Weak transcription NHLF lung
28 chr6:110121800-110146200 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:110122000-110142000 Weak transcription Primary hematopoietic stem cells blood
30 chr6:110122200-110146200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr6:110122600-110141200 Weak transcription Fetal Stomach stomach
32 chr6:110123400-110144200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr6:110125600-110145800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr6:110126600-110144400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr6:110126600-110152400 Weak transcription H9 Cell Line embryonic stem cell
36 chr6:110128200-110146000 Weak transcription Fetal Intestine Small intestine
37 chr6:110130000-110155800 Weak transcription HSMMtube muscle
38 chr6:110130600-110140800 Weak transcription GM12878-XiMat blood
39 chr6:110131800-110141200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:110131800-110152400 Weak transcription Esophagus oesophagus
41 chr6:110132000-110149800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr6:110132200-110145600 Weak transcription Ovary ovary
43 chr6:110132400-110151800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr6:110133600-110144400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr6:110133800-110140400 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:110133800-110141600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr6:110134000-110142200 Strong transcription Primary monocytes fromperipheralblood blood
48 chr6:110134000-110143000 Strong transcription Aorta Aorta
49 chr6:110134000-110143000 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr6:110134000-110144400 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015