The 2.0 version of rSNPBase

Variant report

Variant rs59195173
Chromosome Location chr1:150052064-150052065
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:150040400-150056400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:150040400-150061600 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:150040400-150082800 Weak transcription Small Intestine intestine
6 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
7 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
8 chr1:150040600-150072200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:150040800-150054400 Weak transcription Aorta Aorta
11 chr1:150041000-150053600 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:150041000-150064000 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:150041000-150114400 Weak transcription Right Ventricle heart
14 chr1:150041200-150054800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:150041400-150053600 Weak transcription Fetal Kidney kidney
16 chr1:150041400-150055800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:150041400-150056000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:150041400-150066000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:150041400-150067800 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:150041400-150069200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:150041800-150058200 Strong transcription Osteobl bone
22 chr1:150042200-150073400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:150042200-150086600 Weak transcription Gastric stomach
24 chr1:150042400-150063200 Weak transcription NHEK skin
25 chr1:150042400-150067600 Weak transcription Psoas Muscle Psoas
26 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
27 chr1:150043200-150060200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:150043400-150060400 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr1:150043600-150055200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:150044200-150056000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:150044200-150056000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:150045200-150053600 Weak transcription HMEC breast
33 chr1:150045600-150058200 Strong transcription Fetal Lung lung
34 chr1:150045800-150052800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:150045800-150060000 Strong transcription Primary monocytes fromperipheralblood blood
36 chr1:150046000-150053400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:150046600-150056200 Strong transcription HUVEC blood vessel
38 chr1:150046600-150057600 Strong transcription Fetal Intestine Large intestine
39 chr1:150046600-150060000 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr1:150047400-150054400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:150047400-150058200 Strong transcription NH-A brain
42 chr1:150047400-150060400 Strong transcription Rectal Mucosa Donor 31 rectum
43 chr1:150047600-150056800 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr1:150048200-150055200 Strong transcription Fetal Brain Female brain
45 chr1:150048400-150053000 Strong transcription Brain Hippocampus Middle brain
46 chr1:150048400-150056600 Strong transcription Colon Smooth Muscle Colon
47 chr1:150048400-150068400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:150048600-150054400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:150048600-150056600 Strong transcription Primary T cells fromperipheralblood blood
50 chr1:150048600-150060400 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015