The 2.0 version of rSNPBase

Variant report

Variant rs74124332
Chromosome Location chr1:150124958-150124959
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150114800-150125200 Weak transcription Hela-S3 cervix
2 chr1:150120800-150125200 Active TSS Brain Hippocampus Middle brain
3 chr1:150120800-150125200 Active TSS Duodenum Smooth Muscle Duodenum
4 chr1:150121000-150125000 Active TSS Brain Angular Gyrus brain
5 chr1:150121400-150125800 Active TSS Right Ventricle heart
6 chr1:150121600-150125000 Active TSS Rectal Smooth Muscle rectum
7 chr1:150121800-150125200 Active TSS Liver Liver
8 chr1:150123000-150125200 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:150123000-150125400 Transcr. at gene 5' and 3' Dnd41 blood
10 chr1:150123200-150125200 Flanking Active TSS Primary B cells from cord blood blood
11 chr1:150123200-150125200 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
12 chr1:150123200-150128600 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
13 chr1:150123200-150135400 Weak transcription A549 lung
14 chr1:150123400-150128000 Weak transcription Gastric stomach
15 chr1:150123400-150134400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:150123400-150134400 Weak transcription NHEK skin
17 chr1:150123600-150125400 Transcr. at gene 5' and 3' NH-A brain
18 chr1:150123600-150127000 Transcr. at gene 5' and 3' Brain Germinal Matrix brain
19 chr1:150123600-150127000 Weak transcription Small Intestine intestine
20 chr1:150123800-150125000 Enhancers HepG2 liver
21 chr1:150123800-150125600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:150123800-150125800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:150123800-150126200 Weak transcription Ovary ovary
24 chr1:150123800-150127400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:150123800-150127800 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
26 chr1:150123800-150131200 Weak transcription Pancreas Pancrea
27 chr1:150123800-150134200 Weak transcription HMEC breast
28 chr1:150123800-150134600 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr1:150124000-150125200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:150124000-150125400 Transcr. at gene 5' and 3' HSMM muscle
31 chr1:150124000-150125800 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
32 chr1:150124000-150126200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:150124000-150128000 Transcr. at gene 5' and 3' GM12878-XiMat blood
34 chr1:150124200-150125000 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
35 chr1:150124200-150125200 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr1:150124200-150125200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:150124200-150125200 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
38 chr1:150124200-150125200 Transcr. at gene 5' and 3' NHLF lung
39 chr1:150124200-150125400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
40 chr1:150124200-150125600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr1:150124200-150125600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:150124200-150125800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr1:150124200-150125800 Genic enhancers Fetal Lung lung
44 chr1:150124200-150126000 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr1:150124200-150126400 Genic enhancers Primary hematopoietic stem cells blood
46 chr1:150124200-150126800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
47 chr1:150124200-150127000 Transcr. at gene 5' and 3' Fetal Brain Female brain
48 chr1:150124200-150127400 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:150124200-150127600 Genic enhancers Primary T cells fromperipheralblood blood
50 chr1:150124200-150131000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015