The 2.0 version of rSNPBase

Variant report

Variant rs74127449
Chromosome Location chr1:150085287-150085288
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
3 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
4 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:150041000-150114400 Weak transcription Right Ventricle heart
6 chr1:150042200-150086600 Weak transcription Gastric stomach
7 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
8 chr1:150052000-150116800 Weak transcription Spleen Spleen
9 chr1:150055000-150086200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:150055000-150100600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:150055000-150120800 Weak transcription Aorta Aorta
12 chr1:150055200-150096000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:150055200-150104800 Weak transcription Brain Cingulate Gyrus brain
14 chr1:150056600-150086400 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:150060000-150096000 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:150061000-150116800 Weak transcription Ovary ovary
17 chr1:150066200-150086600 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr1:150066200-150087800 Weak transcription HSMMtube muscle
19 chr1:150066200-150096600 Weak transcription Rectal Smooth Muscle rectum
20 chr1:150067000-150113200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:150067200-150086400 Weak transcription HMEC breast
22 chr1:150067200-150101200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr1:150067400-150086800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:150067400-150087200 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:150067400-150121200 Weak transcription Colonic Mucosa Colon
26 chr1:150069000-150086800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:150069000-150093600 Weak transcription NHEK skin
28 chr1:150069000-150113800 Weak transcription Fetal Kidney kidney
29 chr1:150069000-150121000 Weak transcription NHLF lung
30 chr1:150070400-150087200 Weak transcription Duodenum Mucosa Duodenum
31 chr1:150071000-150121000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:150071200-150086400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:150071200-150120600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:150071400-150092200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:150071400-150093400 Weak transcription Hela-S3 cervix
36 chr1:150072400-150121000 Weak transcription Brain Angular Gyrus brain
37 chr1:150073000-150086200 Weak transcription Fetal Intestine Large intestine
38 chr1:150073400-150085400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:150073400-150094400 Weak transcription Liver Liver
40 chr1:150077200-150113000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:150077400-150112800 Weak transcription Fetal Heart heart
42 chr1:150079200-150121000 Weak transcription Thymus Thymus
43 chr1:150082400-150086800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:150082600-150085600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:150082600-150085800 Strong transcription Primary monocytes fromperipheralblood blood
46 chr1:150082600-150085800 Strong transcription Fetal Muscle Trunk muscle
47 chr1:150082600-150086400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:150082800-150085400 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:150082800-150086200 Weak transcription GM12878-XiMat blood
50 chr1:150083200-150086000 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015