Variant report
| Variant | rs59451280 |
|---|---|
| Chromosome Location | chr1:180603960-180603961 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180600800-180604400 | Active TSS | Fetal Brain Male | brain |
| 2 | chr1:180601000-180604200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 3 | chr1:180601000-180606000 | Active TSS | Right Ventricle | heart |
| 4 | chr1:180601200-180605800 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr1:180602000-180615800 | Weak transcription | Lung | lung |
| 6 | chr1:180602000-180618800 | Weak transcription | Pancreas | Pancrea |
| 7 | chr1:180602000-180645200 | Weak transcription | Gastric | stomach |
| 8 | chr1:180602200-180605000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 9 | chr1:180602200-180608200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 10 | chr1:180602200-180608200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 11 | chr1:180602400-180604000 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 12 | chr1:180602400-180605600 | Active TSS | Fetal Brain Female | brain |
| 13 | chr1:180602400-180605800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 14 | chr1:180602400-180611000 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr1:180602400-180612400 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr1:180602400-180612600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 17 | chr1:180603000-180604200 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 18 | chr1:180603000-180605000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 19 | chr1:180603000-180614800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 20 | chr1:180603200-180604000 | Weak transcription | Fetal Intestine Large | intestine |
| 21 | chr1:180603200-180604800 | Weak transcription | Small Intestine | intestine |
| 22 | chr1:180603200-180606000 | Weak transcription | Liver | Liver |
| 23 | chr1:180603200-180606800 | Weak transcription | NH-A | brain |
| 24 | chr1:180603200-180612000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 25 | chr1:180603200-180614400 | Weak transcription | Primary B cells from cord blood | blood |
| 26 | chr1:180603200-180615200 | Weak transcription | HSMM | muscle |
| 27 | chr1:180603200-180615800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr1:180603200-180616400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr1:180603200-180622400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr1:180603400-180604000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr1:180603400-180604600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr1:180603400-180604600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 33 | chr1:180603400-180605000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 34 | chr1:180603400-180605200 | Weak transcription | Brain Substantia Nigra | brain |
| 35 | chr1:180603400-180605400 | Active TSS | Right Atrium | heart |
| 36 | chr1:180603400-180605600 | Weak transcription | Brain Anterior Caudate | brain |
| 37 | chr1:180603400-180605600 | Weak transcription | Brain Hippocampus Middle | brain |
| 38 | chr1:180603400-180605600 | Weak transcription | Left Ventricle | heart |
| 39 | chr1:180603400-180605800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 40 | chr1:180603400-180611200 | Weak transcription | Psoas Muscle | Psoas |
| 41 | chr1:180603400-180613000 | Weak transcription | Ovary | ovary |
| 42 | chr1:180603400-180614800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 43 | chr1:180603400-180615400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 44 | chr1:180603400-180615600 | Weak transcription | HUVEC | blood vessel |
| 45 | chr1:180603400-180617000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 46 | chr1:180603400-180619400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 47 | chr1:180603600-180604000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr1:180603600-180604800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 49 | chr1:180603600-180605000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 50 | chr1:180603600-180605200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
