The 2.0 version of rSNPBase

Variant report

Variant rs73047700
Chromosome Location chr1:180615901-180615902
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180602000-180618800 Weak transcription Pancreas Pancrea
2 chr1:180602000-180645200 Weak transcription Gastric stomach
3 chr1:180603200-180616400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:180603200-180622400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:180603400-180617000 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr1:180603400-180619400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:180603600-180626400 Weak transcription Fetal Lung lung
8 chr1:180604000-180623200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:180604800-180617000 Weak transcription Dnd41 blood
10 chr1:180605600-180625800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:180605800-180622000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:180605800-180625000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:180606000-180618200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:180608200-180617000 Weak transcription Fetal Intestine Large intestine
15 chr1:180609800-180625800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:180610200-180617000 Weak transcription Primary B cells from peripheral blood blood
17 chr1:180612800-180616200 Strong transcription Primary T cells from cord blood blood
18 chr1:180612800-180626400 Weak transcription Primary hematopoietic stem cells blood
19 chr1:180613000-180623000 Weak transcription Brain Anterior Caudate brain
20 chr1:180613200-180616200 Weak transcription Stomach Smooth Muscle stomach
21 chr1:180613200-180617200 Weak transcription A549 lung
22 chr1:180613200-180632600 Weak transcription Aorta Aorta
23 chr1:180613400-180616200 Weak transcription Brain Substantia Nigra brain
24 chr1:180613400-180616200 Enhancers Pancreatic Islets Pancreatic Islet
25 chr1:180613400-180616800 Weak transcription HSMMtube muscle
26 chr1:180613400-180617800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:180613400-180617800 Weak transcription Fetal Brain Female brain
28 chr1:180613400-180621800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:180613400-180626400 Weak transcription Adipose Nuclei Adipose
30 chr1:180613400-180626600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:180614000-180616800 Enhancers Left Ventricle heart
32 chr1:180614400-180616200 Weak transcription Right Atrium heart
33 chr1:180614600-180616600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:180614800-180616000 Enhancers Primary T regulatory cells fromperipheralblood blood
35 chr1:180614800-180616000 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr1:180614800-180616000 Weak transcription Right Ventricle heart
37 chr1:180614800-180616000 Enhancers Sigmoid Colon Sigmoid Colon
38 chr1:180615000-180616400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:180615000-180616400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:180615200-180616000 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:180615200-180616200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:180615200-180617400 Weak transcription GM12878-XiMat blood
43 chr1:180615400-180616000 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr1:180615400-180616200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr1:180615400-180616200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr1:180615600-180616600 Genic enhancers K562 blood
47 chr1:180615600-180618800 Weak transcription Fetal Heart heart
48 chr1:180615600-180623800 Weak transcription Primary B cells from cord blood blood
49 chr1:180615800-180617000 Enhancers Lung lung
50 chr1:180615800-180617800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015