Variant report
| Variant | rs6425654 |
|---|---|
| Chromosome Location | chr1:180769892-180769893 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180713000-180814200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 2 | chr1:180740800-180775600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 3 | chr1:180741600-180784000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 4 | chr1:180751400-180774600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 5 | chr1:180754800-180781600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 6 | chr1:180755000-180783800 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr1:180755400-180775800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 8 | chr1:180755400-180803800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 9 | chr1:180755400-180820400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 10 | chr1:180755600-180774200 | Weak transcription | Dnd41 | blood |
| 11 | chr1:180755600-180775200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 12 | chr1:180755800-180777800 | Weak transcription | Fetal Brain Female | brain |
| 13 | chr1:180756000-180774600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 14 | chr1:180756000-180781400 | Weak transcription | Liver | Liver |
| 15 | chr1:180756800-180778800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr1:180756800-180810200 | Weak transcription | Fetal Brain Male | brain |
| 17 | chr1:180757400-180779400 | Weak transcription | Left Ventricle | heart |
| 18 | chr1:180758000-180804000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 19 | chr1:180758600-180774400 | Weak transcription | K562 | blood |
| 20 | chr1:180758600-180781200 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr1:180758800-180772600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 22 | chr1:180759000-180775400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 23 | chr1:180759000-180776800 | Weak transcription | Primary T cells from cord blood | blood |
| 24 | chr1:180759000-180794800 | Weak transcription | Fetal Intestine Small | intestine |
| 25 | chr1:180759200-180772600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr1:180759200-180774600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 27 | chr1:180759200-180774600 | Weak transcription | Primary B cells from cord blood | blood |
| 28 | chr1:180759400-180775200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr1:180759600-180775600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 30 | chr1:180761200-180772000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 31 | chr1:180761200-180789200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr1:180761400-180772600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 33 | chr1:180761400-180784400 | Weak transcription | NHEK | skin |
| 34 | chr1:180761400-180794000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 35 | chr1:180761400-180796400 | Weak transcription | HMEC | breast |
| 36 | chr1:180761400-180804600 | Weak transcription | Aorta | Aorta |
| 37 | chr1:180762000-180780600 | Weak transcription | Osteobl | bone |
| 38 | chr1:180762000-180785200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 39 | chr1:180762600-180775600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 40 | chr1:180762800-180775400 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 41 | chr1:180763200-180775000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 42 | chr1:180763200-180775200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 43 | chr1:180763200-180780600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 44 | chr1:180763600-180806800 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr1:180763800-180780400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr1:180765000-180775200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 47 | chr1:180766200-180784800 | Weak transcription | Fetal Lung | lung |
| 48 | chr1:180766400-180773400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 49 | chr1:180767400-180770200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 50 | chr1:180767400-180820400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
