Variant report
| Variant | rs6688797 |
|---|---|
| Chromosome Location | chr1:180816128-180816129 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180755400-180820400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 2 | chr1:180767400-180820400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 3 | chr1:180772000-180823200 | Weak transcription | Fetal Stomach | stomach |
| 4 | chr1:180773400-180849200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 5 | chr1:180773800-180853200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 6 | chr1:180775000-180831600 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr1:180779800-180850800 | Weak transcription | Small Intestine | intestine |
| 8 | chr1:180782200-180817800 | Weak transcription | Lung | lung |
| 9 | chr1:180791400-180822600 | Weak transcription | Fetal Heart | heart |
| 10 | chr1:180796400-180851000 | Weak transcription | Fetal Intestine Small | intestine |
| 11 | chr1:180796600-180827200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr1:180796800-180817400 | Weak transcription | HepG2 | liver |
| 13 | chr1:180796800-180827400 | Weak transcription | NHEK | skin |
| 14 | chr1:180796800-180831600 | Weak transcription | A549 | lung |
| 15 | chr1:180797000-180822000 | Weak transcription | HUVEC | blood vessel |
| 16 | chr1:180802600-180833000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr1:180802600-180834600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 18 | chr1:180802800-180823200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr1:180803000-180822800 | Weak transcription | Colon Smooth Muscle | Colon |
| 20 | chr1:180803600-180843200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr1:180804800-180842800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 22 | chr1:180805000-180818000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 23 | chr1:180805000-180818800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 24 | chr1:180805000-180829600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 25 | chr1:180805800-180822600 | Weak transcription | Adipose Nuclei | Adipose |
| 26 | chr1:180805800-180835000 | Weak transcription | Fetal Intestine Large | intestine |
| 27 | chr1:180805800-180881000 | Weak transcription | Aorta | Aorta |
| 28 | chr1:180806200-180820400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 29 | chr1:180806200-180824600 | Weak transcription | Left Ventricle | heart |
| 30 | chr1:180806400-180820200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 31 | chr1:180806400-180820400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 32 | chr1:180806400-180820600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 33 | chr1:180806400-180821400 | Weak transcription | K562 | blood |
| 34 | chr1:180806600-180819800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 35 | chr1:180806800-180820200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 36 | chr1:180807000-180818200 | Weak transcription | Primary T cells from cord blood | blood |
| 37 | chr1:180807200-180832800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 38 | chr1:180807600-180823600 | Weak transcription | Right Ventricle | heart |
| 39 | chr1:180808000-180818400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 40 | chr1:180808800-180820200 | Weak transcription | Dnd41 | blood |
| 41 | chr1:180809000-180818800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr1:180811800-180822800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 43 | chr1:180812200-180823600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 44 | chr1:180812200-180831400 | Weak transcription | Fetal Lung | lung |
| 45 | chr1:180812200-180867000 | Weak transcription | Ovary | ovary |
| 46 | chr1:180812400-180818400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 47 | chr1:180812400-180818800 | Weak transcription | Fetal Brain Male | brain |
| 48 | chr1:180812400-180822400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 49 | chr1:180812400-180823200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 50 | chr1:180812400-180830800 | Weak transcription | Fetal Brain Female | brain |
