Variant report

Variant rs12073289
Chromosome Location chr1:180821691-180821692
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180772000-180823200 Weak transcription Fetal Stomach stomach
2 chr1:180773400-180849200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr1:180773800-180853200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:180775000-180831600 Weak transcription Brain Hippocampus Middle brain
5 chr1:180779800-180850800 Weak transcription Small Intestine intestine
6 chr1:180791400-180822600 Weak transcription Fetal Heart heart
7 chr1:180796400-180851000 Weak transcription Fetal Intestine Small intestine
8 chr1:180796600-180827200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:180796800-180827400 Weak transcription NHEK skin
10 chr1:180796800-180831600 Weak transcription A549 lung
11 chr1:180797000-180822000 Weak transcription HUVEC blood vessel
12 chr1:180802600-180833000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:180802600-180834600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:180802800-180823200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:180803000-180822800 Weak transcription Colon Smooth Muscle Colon
16 chr1:180803600-180843200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:180804800-180842800 Weak transcription Duodenum Mucosa Duodenum
18 chr1:180805000-180829600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:180805800-180822600 Weak transcription Adipose Nuclei Adipose
20 chr1:180805800-180835000 Weak transcription Fetal Intestine Large intestine
21 chr1:180805800-180881000 Weak transcription Aorta Aorta
22 chr1:180806200-180824600 Weak transcription Left Ventricle heart
23 chr1:180807200-180832800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:180807600-180823600 Weak transcription Right Ventricle heart
25 chr1:180811800-180822800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:180812200-180823600 Weak transcription H1 Cell Line embryonic stem cell
27 chr1:180812200-180831400 Weak transcription Fetal Lung lung
28 chr1:180812200-180867000 Weak transcription Ovary ovary
29 chr1:180812400-180822400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:180812400-180823200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:180812400-180830800 Weak transcription Fetal Brain Female brain
32 chr1:180812600-180823000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:180812600-180835000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:180817200-180823400 Weak transcription Rectal Smooth Muscle rectum
35 chr1:180818600-180833200 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:180818800-180823800 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:180819200-180851000 Weak transcription Fetal Brain Male brain
38 chr1:180820000-180822800 Weak transcription Brain Germinal Matrix brain
39 chr1:180820200-180823600 Enhancers Dnd41 blood
40 chr1:180820400-180822000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:180820400-180822000 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr1:180820400-180823000 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr1:180820400-180823200 Enhancers Primary T helper cells fromperipheralblood blood
44 chr1:180820400-180824000 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr1:180820600-180822800 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr1:180820600-180823000 Enhancers GM12878-XiMat blood
47 chr1:180820800-180821800 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:180820800-180822000 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr1:180820800-180823400 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr1:180821000-180821800 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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