The 2.0 version of rSNPBase

Variant report

Variant rs12066418
Chromosome Location chr1:180755084-180755085
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180713000-180814200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:180740200-180761000 Weak transcription Psoas Muscle Psoas
3 chr1:180740800-180775600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:180741000-180757200 Weak transcription Primary B cells from cord blood blood
5 chr1:180741600-180784000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:180743400-180757200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:180743400-180763000 Weak transcription HSMM muscle
8 chr1:180744000-180757200 Weak transcription Primary T cells from cord blood blood
9 chr1:180747000-180756800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:180747800-180761000 Weak transcription Aorta Aorta
11 chr1:180748200-180755800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:180749400-180761200 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr1:180749600-180761200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:180751400-180774600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:180753000-180756600 Weak transcription Left Ventricle heart
16 chr1:180754000-180756800 Enhancers Fetal Brain Male brain
17 chr1:180754200-180756000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:180754400-180761000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:180754400-180761200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:180754600-180755800 Weak transcription Pancreas Pancrea
21 chr1:180754600-180758400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:180754600-180763400 Weak transcription NHLF lung
23 chr1:180754800-180755200 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:180754800-180755200 Weak transcription Liver Liver
25 chr1:180754800-180757000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:180754800-180763800 Weak transcription A549 lung
27 chr1:180754800-180781600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:180755000-180755200 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr1:180755000-180755200 Enhancers Fetal Brain Female brain
30 chr1:180755000-180755400 Enhancers HepG2 liver
31 chr1:180755000-180761000 Weak transcription Osteobl bone
32 chr1:180755000-180783800 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015