The 2.0 version of rSNPBase

Variant report

Variant rs12087806
Chromosome Location chr1:180710395-180710396
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180704200-180711800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:180704200-180713200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:180704400-180712600 Weak transcription K562 blood
4 chr1:180706400-180711000 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:180708000-180710800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:180708400-180722400 Weak transcription Aorta Aorta
7 chr1:180708600-180711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:180709000-180710400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:180709200-180710400 ZNF genes & repeats Primary T cells from cord blood blood
10 chr1:180709400-180710400 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr1:180710000-180717200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:180710200-180712800 Weak transcription Primary B cells from cord blood blood
13 chr1:180710200-180714400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015