The 2.0 version of rSNPBase

Variant report

Variant rs7517852
Chromosome Location chr1:180642909-180642910
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180602000-180645200 Weak transcription Gastric stomach
2 chr1:180631600-180644400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:180632200-180644800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:180633200-180672000 Weak transcription K562 blood
5 chr1:180634000-180643400 Weak transcription Left Ventricle heart
6 chr1:180634800-180643800 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:180635000-180644800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:180635200-180654800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:180636400-180647200 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:180636400-180651800 Weak transcription Ovary ovary
11 chr1:180640200-180643800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:180640200-180662200 Weak transcription Fetal Heart heart
13 chr1:180640600-180660600 Weak transcription Right Ventricle heart
14 chr1:180641000-180653200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:180641200-180644000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:180641200-180644400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:180641200-180647400 Weak transcription Fetal Intestine Small intestine
18 chr1:180641200-180653400 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:180641200-180662800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:180641400-180644800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:180641600-180661200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:180641800-180644800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:180642200-180658200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:180642400-180644600 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:180642600-180643000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:180642600-180643000 Enhancers Primary B cells from peripheral blood blood
27 chr1:180642600-180644000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:180642800-180643000 Enhancers A549 lung
29 chr1:180642800-180643200 ZNF genes & repeats Primary T cells from cord blood blood
30 chr1:180642800-180644800 Weak transcription Aorta Aorta
31 chr1:180642800-180644800 Weak transcription Small Intestine intestine
32 chr1:180642800-180646200 Weak transcription Pancreas Pancrea

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015