The 2.0 version of rSNPBase

Variant report

Variant rs12073086
Chromosome Location chr1:180764753-180764754
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180713000-180814200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:180740800-180775600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:180741600-180784000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr1:180751400-180774600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr1:180754800-180781600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:180755000-180783800 Weak transcription Fetal Intestine Large intestine
7 chr1:180755400-180775800 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:180755400-180803800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:180755400-180820400 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:180755600-180774200 Weak transcription Dnd41 blood
11 chr1:180755600-180775200 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:180755800-180766400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:180755800-180777800 Weak transcription Fetal Brain Female brain
14 chr1:180756000-180774600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:180756000-180781400 Weak transcription Liver Liver
16 chr1:180756800-180778800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr1:180756800-180810200 Weak transcription Fetal Brain Male brain
18 chr1:180757400-180779400 Weak transcription Left Ventricle heart
19 chr1:180758000-180804000 Weak transcription Duodenum Mucosa Duodenum
20 chr1:180758600-180774400 Weak transcription K562 blood
21 chr1:180758600-180781200 Weak transcription Adipose Nuclei Adipose
22 chr1:180758800-180772600 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:180759000-180775400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:180759000-180776800 Weak transcription Primary T cells from cord blood blood
25 chr1:180759000-180794800 Weak transcription Fetal Intestine Small intestine
26 chr1:180759200-180772600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:180759200-180774600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:180759200-180774600 Weak transcription Primary B cells from cord blood blood
29 chr1:180759400-180775200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:180759600-180775600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:180761200-180772000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:180761200-180789200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:180761400-180772600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:180761400-180784400 Weak transcription NHEK skin
35 chr1:180761400-180794000 Weak transcription Primary B cells from peripheral blood blood
36 chr1:180761400-180796400 Weak transcription HMEC breast
37 chr1:180761400-180804600 Weak transcription Aorta Aorta
38 chr1:180762000-180780600 Weak transcription Osteobl bone
39 chr1:180762000-180785200 Weak transcription Primary hematopoietic stem cells blood
40 chr1:180762600-180775600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:180762800-180775400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:180763200-180765800 Weak transcription HSMM muscle
43 chr1:180763200-180775000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr1:180763200-180775200 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:180763200-180780600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:180763600-180806800 Weak transcription Psoas Muscle Psoas
47 chr1:180763800-180780400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:180764000-180769600 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr1:180764600-180765000 Enhancers HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015