The 2.0 version of rSNPBase

Variant report

Variant rs73049494
Chromosome Location chr1:180635006-180635007
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180602000-180645200 Weak transcription Gastric stomach
2 chr1:180627600-180640000 Weak transcription Fetal Heart heart
3 chr1:180629600-180641000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:180631200-180636000 Weak transcription Ovary ovary
5 chr1:180631600-180644400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:180632200-180644800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:180632400-180635400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:180632400-180635400 ZNF genes & repeats Brain Germinal Matrix brain
9 chr1:180633000-180635200 Weak transcription Stomach Smooth Muscle stomach
10 chr1:180633000-180636000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:180633200-180635200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:180633200-180636200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:180633200-180672000 Weak transcription K562 blood
14 chr1:180633400-180642600 Weak transcription Pancreas Pancrea
15 chr1:180633600-180635200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
16 chr1:180633600-180635600 Strong transcription Primary B cells from cord blood blood
17 chr1:180633800-180635600 Weak transcription Fetal Intestine Large intestine
18 chr1:180633800-180640200 Weak transcription Right Ventricle heart
19 chr1:180634000-180635400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:180634000-180643400 Weak transcription Left Ventricle heart
21 chr1:180634200-180635600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
22 chr1:180634200-180636200 ZNF genes & repeats Primary T cells from cord blood blood
23 chr1:180634400-180635200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
24 chr1:180634600-180635200 ZNF genes & repeats Dnd41 blood
25 chr1:180634600-180635800 Weak transcription Fetal Brain Male brain
26 chr1:180634800-180637400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:180634800-180637400 Weak transcription Lung lung
28 chr1:180634800-180639800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:180634800-180640400 Weak transcription Aorta Aorta
30 chr1:180634800-180643800 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:180635000-180635200 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
32 chr1:180635000-180637400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:180635000-180642600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:180635000-180644800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015