The 2.0 version of rSNPBase

Variant report

Variant rs6667050
Chromosome Location chr1:180796991-180796992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180713000-180814200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:180755400-180803800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:180755400-180820400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:180756800-180810200 Weak transcription Fetal Brain Male brain
5 chr1:180758000-180804000 Weak transcription Duodenum Mucosa Duodenum
6 chr1:180761400-180804600 Weak transcription Aorta Aorta
7 chr1:180763600-180806800 Weak transcription Psoas Muscle Psoas
8 chr1:180767400-180820400 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:180768000-180812000 Weak transcription Pancreas Pancrea
10 chr1:180769000-180802000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr1:180771000-180813600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:180772000-180823200 Weak transcription Fetal Stomach stomach
13 chr1:180772200-180801800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:180773000-180799800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:180773000-180802200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:180773400-180849200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:180773800-180853200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:180774000-180806800 Weak transcription Placenta Placenta
19 chr1:180774400-180797200 Weak transcription Fetal Muscle Trunk muscle
20 chr1:180775000-180831600 Weak transcription Brain Hippocampus Middle brain
21 chr1:180776400-180798400 Weak transcription Stomach Smooth Muscle stomach
22 chr1:180776400-180801800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:180776600-180801800 Weak transcription Dnd41 blood
24 chr1:180778400-180799400 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:180778600-180805600 Weak transcription Brain Germinal Matrix brain
26 chr1:180779000-180807400 Weak transcription Right Ventricle heart
27 chr1:180779800-180850800 Weak transcription Small Intestine intestine
28 chr1:180780000-180801600 Weak transcription Brain Angular Gyrus brain
29 chr1:180781600-180801600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:180781600-180805600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:180781800-180807000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:180781800-180810400 Weak transcription HSMM muscle
33 chr1:180782200-180799800 Weak transcription Ovary ovary
34 chr1:180782200-180801800 Weak transcription Adipose Nuclei Adipose
35 chr1:180782200-180817800 Weak transcription Lung lung
36 chr1:180782600-180809000 Weak transcription Primary monocytes fromperipheralblood blood
37 chr1:180783000-180801800 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:180783000-180802400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:180783400-180802000 Weak transcription Liver Liver
40 chr1:180784400-180797200 Weak transcription Fetal Intestine Large intestine
41 chr1:180784800-180811600 Weak transcription HSMMtube muscle
42 chr1:180785600-180805400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:180785800-180804000 Weak transcription Primary hematopoietic stem cells blood
44 chr1:180789600-180809200 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr1:180790400-180801800 Weak transcription Fetal Lung lung
46 chr1:180790600-180798400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:180790600-180799800 Weak transcription Primary B cells from cord blood blood
48 chr1:180790600-180799800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:180790600-180801800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:180790600-180801800 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015