The 2.0 version of rSNPBase

Variant report

Variant rs10914063
Chromosome Location chr1:180640840-180640841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180602000-180645200 Weak transcription Gastric stomach
2 chr1:180629600-180641000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:180631600-180644400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:180632200-180644800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:180633200-180672000 Weak transcription K562 blood
6 chr1:180633400-180642600 Weak transcription Pancreas Pancrea
7 chr1:180634000-180643400 Weak transcription Left Ventricle heart
8 chr1:180634800-180643800 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:180635000-180642600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:180635000-180644800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:180635200-180654800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:180636400-180647200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:180636400-180651800 Weak transcription Ovary ovary
14 chr1:180636600-180641200 Weak transcription Fetal Brain Male brain
15 chr1:180639000-180641200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
16 chr1:180639600-180641000 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
17 chr1:180639800-180641200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:180640200-180643800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:180640200-180662200 Weak transcription Fetal Heart heart
20 chr1:180640600-180641200 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:180640600-180641200 ZNF genes & repeats Fetal Intestine Small intestine
22 chr1:180640600-180660600 Weak transcription Right Ventricle heart
23 chr1:180640800-180641400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015