The 2.0 version of rSNPBase

Variant report

Variant rs12092161
Chromosome Location chr1:180833087-180833088
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180773400-180849200 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr1:180773800-180853200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:180779800-180850800 Weak transcription Small Intestine intestine
4 chr1:180796400-180851000 Weak transcription Fetal Intestine Small intestine
5 chr1:180802600-180834600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:180803600-180843200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:180804800-180842800 Weak transcription Duodenum Mucosa Duodenum
8 chr1:180805800-180835000 Weak transcription Fetal Intestine Large intestine
9 chr1:180805800-180881000 Weak transcription Aorta Aorta
10 chr1:180812200-180867000 Weak transcription Ovary ovary
11 chr1:180812600-180835000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:180818600-180833200 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:180819200-180851000 Weak transcription Fetal Brain Male brain
14 chr1:180821200-180842200 Weak transcription Primary B cells from cord blood blood
15 chr1:180822000-180833800 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:180822000-180842200 Weak transcription Primary B cells from peripheral blood blood
17 chr1:180822000-180862800 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:180822800-180862800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:180823000-180854600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:180823400-180843000 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:180823600-180833200 Weak transcription Dnd41 blood
22 chr1:180823600-180835000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:180823600-180847800 Weak transcription Primary T cells from cord blood blood
24 chr1:180823600-180860000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:180823800-180833200 Weak transcription Adipose Nuclei Adipose
26 chr1:180823800-180833400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:180823800-180851000 Weak transcription Fetal Kidney kidney
28 chr1:180823800-180851400 Weak transcription Pancreas Pancrea
29 chr1:180823800-180862600 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:180824000-180835000 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:180824000-180848000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:180824000-180867600 Weak transcription Fetal Muscle Leg muscle
33 chr1:180824000-180880800 Weak transcription Right Ventricle heart
34 chr1:180824200-180851000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:180825200-180834200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr1:180825200-180835000 Weak transcription Left Ventricle heart
37 chr1:180825200-180841800 Weak transcription K562 blood
38 chr1:180827800-180833200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:180827800-180856600 Weak transcription Primary hematopoietic stem cells blood
40 chr1:180828000-180833200 Weak transcription HMEC breast
41 chr1:180828000-180835000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:180828000-180852400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:180828000-180853200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:180828000-180853200 Weak transcription NHEK skin
45 chr1:180828600-180833200 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr1:180828600-180867800 Weak transcription HSMM muscle
47 chr1:180828800-180851000 Weak transcription Brain Germinal Matrix brain
48 chr1:180829800-180834600 Weak transcription Placenta Placenta
49 chr1:180830000-180867600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:180831000-180851400 Weak transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015