The 2.0 version of rSNPBase

Variant report

Variant rs6682537
Chromosome Location chr1:180817067-180817068
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180755400-180820400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:180767400-180820400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:180772000-180823200 Weak transcription Fetal Stomach stomach
4 chr1:180773400-180849200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:180773800-180853200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:180775000-180831600 Weak transcription Brain Hippocampus Middle brain
7 chr1:180779800-180850800 Weak transcription Small Intestine intestine
8 chr1:180782200-180817800 Weak transcription Lung lung
9 chr1:180791400-180822600 Weak transcription Fetal Heart heart
10 chr1:180796400-180851000 Weak transcription Fetal Intestine Small intestine
11 chr1:180796600-180827200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:180796800-180817400 Weak transcription HepG2 liver
13 chr1:180796800-180827400 Weak transcription NHEK skin
14 chr1:180796800-180831600 Weak transcription A549 lung
15 chr1:180797000-180822000 Weak transcription HUVEC blood vessel
16 chr1:180802600-180833000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:180802600-180834600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:180802800-180823200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:180803000-180822800 Weak transcription Colon Smooth Muscle Colon
20 chr1:180803600-180843200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:180804800-180842800 Weak transcription Duodenum Mucosa Duodenum
22 chr1:180805000-180818000 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr1:180805000-180818800 Weak transcription Primary B cells from peripheral blood blood
24 chr1:180805000-180829600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:180805800-180822600 Weak transcription Adipose Nuclei Adipose
26 chr1:180805800-180835000 Weak transcription Fetal Intestine Large intestine
27 chr1:180805800-180881000 Weak transcription Aorta Aorta
28 chr1:180806200-180820400 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:180806200-180824600 Weak transcription Left Ventricle heart
30 chr1:180806400-180820200 Weak transcription Primary hematopoietic stem cells blood
31 chr1:180806400-180820400 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:180806400-180820600 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr1:180806400-180821400 Weak transcription K562 blood
34 chr1:180806600-180819800 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:180806800-180820200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:180807000-180818200 Weak transcription Primary T cells from cord blood blood
37 chr1:180807200-180832800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:180807600-180823600 Weak transcription Right Ventricle heart
39 chr1:180808000-180818400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr1:180808800-180820200 Weak transcription Dnd41 blood
41 chr1:180809000-180818800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:180811800-180822800 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:180812200-180823600 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:180812200-180831400 Weak transcription Fetal Lung lung
45 chr1:180812200-180867000 Weak transcription Ovary ovary
46 chr1:180812400-180818400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr1:180812400-180818800 Weak transcription Fetal Brain Male brain
48 chr1:180812400-180822400 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:180812400-180823200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:180812400-180830800 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015