Variant report
| Variant | rs59489558 |
|---|---|
| Chromosome Location | chr11:10266792-10266793 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10253000-10268200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 2 | chr11:10254000-10276200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr11:10254400-10277400 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 4 | chr11:10254600-10268800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 5 | chr11:10255600-10268400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 6 | chr11:10255600-10268400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr11:10255600-10268400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr11:10255600-10277200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 9 | chr11:10255600-10279000 | Weak transcription | Small Intestine | intestine |
| 10 | chr11:10255800-10268400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 11 | chr11:10255800-10277400 | Weak transcription | HSMM | muscle |
| 12 | chr11:10256000-10270800 | Weak transcription | NH-A | brain |
| 13 | chr11:10256400-10268400 | Weak transcription | NHLF | lung |
| 14 | chr11:10256600-10269600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 15 | chr11:10257800-10269000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr11:10259000-10268400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 17 | chr11:10259200-10280200 | Weak transcription | A549 | lung |
| 18 | chr11:10259400-10268200 | Weak transcription | Lung | lung |
| 19 | chr11:10260000-10267800 | Weak transcription | Esophagus | oesophagus |
| 20 | chr11:10261800-10268600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 21 | chr11:10262200-10267400 | Weak transcription | Hela-S3 | cervix |
| 22 | chr11:10262200-10268200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 23 | chr11:10262400-10271800 | Weak transcription | NHDF-Ad | bronchial |
| 24 | chr11:10263600-10273400 | Weak transcription | Spleen | Spleen |
| 25 | chr11:10263600-10280400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr11:10263800-10280200 | Weak transcription | Ovary | ovary |
| 27 | chr11:10264200-10267200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 28 | chr11:10264400-10268600 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr11:10264600-10268400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 30 | chr11:10264600-10277400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr11:10264600-10280400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 32 | chr11:10264600-10280800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 33 | chr11:10264800-10282800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr11:10265600-10267200 | Weak transcription | Fetal Brain Male | brain |
| 35 | chr11:10265800-10267000 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 36 | chr11:10265800-10267600 | Strong transcription | Fetal Lung | lung |
| 37 | chr11:10266000-10270600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr11:10266200-10267000 | Strong transcription | Osteobl | bone |
| 39 | chr11:10266200-10268400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 40 | chr11:10266200-10268600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 41 | chr11:10266400-10266800 | Strong transcription | Fetal Intestine Small | intestine |
| 42 | chr11:10266400-10267000 | Enhancers | Gastric | stomach |
| 43 | chr11:10266400-10267000 | Enhancers | Left Ventricle | heart |
| 44 | chr11:10266400-10267000 | Enhancers | Pancreas | Pancrea |
| 45 | chr11:10266600-10266800 | Enhancers | Aorta | Aorta |
| 46 | chr11:10266600-10272600 | Weak transcription | Fetal Stomach | stomach |
