Variant report
| Variant | rs59588025 |
|---|---|
| Chromosome Location | chr6:109619963-109619964 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:109613400-109620200 | Weak transcription | Right Atrium | heart |
| 2 | chr6:109613600-109620600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 3 | chr6:109614000-109622000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 4 | chr6:109614400-109621000 | Enhancers | Primary hematopoietic stem cells | blood |
| 5 | chr6:109614800-109624400 | Enhancers | K562 | blood |
| 6 | chr6:109615400-109624600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 7 | chr6:109615600-109622200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 8 | chr6:109615600-109622600 | Weak transcription | Left Ventricle | heart |
| 9 | chr6:109615600-109622600 | Weak transcription | Right Ventricle | heart |
| 10 | chr6:109615800-109620200 | Weak transcription | Psoas Muscle | Psoas |
| 11 | chr6:109616200-109624400 | Weak transcription | Hela-S3 | cervix |
| 12 | chr6:109617400-109620400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 13 | chr6:109617800-109621800 | Enhancers | Fetal Lung | lung |
| 14 | chr6:109617800-109623200 | Enhancers | Fetal Muscle Leg | muscle |
| 15 | chr6:109618200-109621000 | Enhancers | Fetal Muscle Trunk | muscle |
| 16 | chr6:109618200-109623400 | Enhancers | Colon Smooth Muscle | Colon |
| 17 | chr6:109618400-109620000 | Enhancers | Adipose Nuclei | Adipose |
| 18 | chr6:109618600-109620200 | Weak transcription | Placenta | Placenta |
| 19 | chr6:109618600-109620200 | Weak transcription | Fetal Stomach | stomach |
| 20 | chr6:109618600-109620200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 21 | chr6:109618600-109621800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 22 | chr6:109618800-109624800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 23 | chr6:109619000-109620000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr6:109619200-109620400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 25 | chr6:109619200-109622800 | Weak transcription | Ovary | ovary |
| 26 | chr6:109619200-109625800 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr6:109619200-109626800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 28 | chr6:109619400-109620200 | Weak transcription | Fetal Thymus | thymus |
| 29 | chr6:109619400-109620200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 30 | chr6:109619400-109620400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 31 | chr6:109619400-109620400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 32 | chr6:109619400-109620400 | Weak transcription | Spleen | Spleen |
| 33 | chr6:109619400-109620800 | Enhancers | Aorta | Aorta |
| 34 | chr6:109619400-109620800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 35 | chr6:109619400-109621200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr6:109619400-109621200 | Weak transcription | Stomach Mucosa | stomach |
| 37 | chr6:109619400-109621400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr6:109619400-109621400 | Weak transcription | Pancreas | Pancrea |
| 39 | chr6:109619400-109622800 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr6:109619400-109623200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 41 | chr6:109619400-109624600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr6:109619400-109625000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 43 | chr6:109619400-109629200 | Weak transcription | Gastric | stomach |
| 44 | chr6:109619400-109638000 | Weak transcription | HepG2 | liver |
| 45 | chr6:109619600-109620000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 46 | chr6:109619600-109620000 | Weak transcription | Fetal Heart | heart |
| 47 | chr6:109619600-109620200 | Weak transcription | Brain Hippocampus Middle | brain |
| 48 | chr6:109619600-109620600 | Weak transcription | Fetal Intestine Large | intestine |
| 49 | chr6:109619600-109621200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr6:109619600-109621800 | Weak transcription | Brain Substantia Nigra | brain |
