Variant report

Variant	rs73762690
Chromosome Location	chr6:109612912-109612913
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs55924095	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57291120	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57826568	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58050355	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59367188	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs59588025	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60819933	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61692511	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73762691	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73762693	0.85[AFR][1000 genomes]
rs73762696	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73762697	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7764993	0.85[EUR][1000 genomes]
rs882073	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9374068	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9487057	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9487060	0.94[ASN][1000 genomes]
rs9791268	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109587600-109614600	Weak transcription	HepG2	liver
2	chr6:109591600-109615200	Weak transcription	Placenta	Placenta
3	chr6:109606200-109614400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr6:109608200-109613200	Weak transcription	Brain Substantia Nigra	brain
5	chr6:109608400-109613200	Weak transcription	Brain Cingulate Gyrus	brain
6	chr6:109608400-109613400	Weak transcription	Fetal Intestine Small	intestine
7	chr6:109609800-109613200	Weak transcription	K562	blood
8	chr6:109611000-109613200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:109611200-109615200	Weak transcription	Esophagus	oesophagus
10	chr6:109611200-109618200	Weak transcription	Gastric	stomach
11	chr6:109611600-109613000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr6:109612000-109613800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr6:109612200-109613200	Weak transcription	Right Atrium	heart
14	chr6:109612600-109613600	Enhancers	Fetal Muscle Leg	muscle
15	chr6:109612600-109615400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr6:109612600-109615600	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr6:109612800-109613600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr6:109612800-109614000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr6:109612800-109614200	Enhancers	Stomach Mucosa	stomach
20	chr6:109612800-109614800	Enhancers	Hela-S3	cervix
21	chr6:109612800-109615200	Enhancers	Rectal Mucosa Donor 31	rectum

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