Variant report
Variant | rs59627467 |
---|---|
Chromosome Location | chr14:81456897-81456898 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:81456409..81459092-chr14:81684225..81686871,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1035145 | 0.98[ASN][1000 genomes] |
rs11850285 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12101255 | 0.84[AFR][1000 genomes] |
rs12101261 | 0.83[AFR][1000 genomes] |
rs12323699 | 0.91[AMR][1000 genomes] |
rs12590262 | 0.99[ASN][1000 genomes] |
rs12892567 | 0.81[ASN][1000 genomes] |
rs17111346 | 0.84[AFR][1000 genomes] |
rs2110695 | 0.84[ASN][1000 genomes] |
rs2160214 | 0.88[ASN][1000 genomes] |
rs2268453 | 0.93[ASN][1000 genomes] |
rs2268462 | 0.93[EUR][1000 genomes] |
rs2268463 | 0.93[EUR][1000 genomes] |
rs2268464 | 0.93[EUR][1000 genomes] |
rs2268465 | 0.90[EUR][1000 genomes] |
rs2284715 | 0.82[ASN][1000 genomes] |
rs2284716 | 0.82[ASN][1000 genomes] |
rs2284721 | 0.88[ASN][1000 genomes] |
rs2284723 | 0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2284725 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2284728 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2284729 | 0.90[EUR][1000 genomes] |
rs2284731 | 0.90[EUR][1000 genomes] |
rs2284732 | 0.90[EUR][1000 genomes] |
rs2300517 | 0.99[ASN][1000 genomes] |
rs2300518 | 0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2300520 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs28440011 | 0.88[AMR][1000 genomes] |
rs35789224 | 0.84[ASN][1000 genomes] |
rs3783944 | 0.89[EUR][1000 genomes] |
rs3783946 | 0.99[ASN][1000 genomes] |
rs58729405 | 0.93[EUR][1000 genomes] |
rs58838870 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59103962 | 0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs67130762 | 0.93[EUR][1000 genomes] |
rs67256654 | 0.93[EUR][1000 genomes] |
rs67391693 | 0.90[EUR][1000 genomes] |
rs68104217 | 0.93[EUR][1000 genomes] |
rs7149747 | 0.87[EUR][1000 genomes] |
rs7149900 | 0.93[EUR][1000 genomes] |
rs7150082 | 0.90[EUR][1000 genomes] |
rs7154106 | 0.93[EUR][1000 genomes] |
rs7154821 | 0.84[ASN][1000 genomes] |
rs72689907 | 0.84[EUR][1000 genomes] |
rs72689910 | 0.84[EUR][1000 genomes] |
rs72693081 | 0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72693091 | 0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs72695035 | 0.83[EUR][1000 genomes] |
rs8003061 | 0.83[AFR][1000 genomes] |
rs8003402 | 0.96[ASN][1000 genomes] |
rs8007809 | 0.90[EUR][1000 genomes] |
rs8022899 | 0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv869348 | chr14:80921098-81535754 | Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:81455400-81463800 | Weak transcription | Thymus | Thymus |
2 | chr14:81455800-81492200 | Weak transcription | Fetal Thymus | thymus |
3 | chr14:81456200-81459400 | Weak transcription | Dnd41 | blood |