Variant report
| Variant | rs5987090 |
|---|---|
| Chromosome Location | chrX:154379088-154379089 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:2)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:2 , 50 per page) page:
1
| No data |
| No data |
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| No data |
| Variant related genes | Relation type |
|---|---|
| MTCP1 | TF binding region |
rSNPs within LD-proxies of this variant (count:28)
| rs_ID | r2[population] |
|---|---|
| rs11156600 | 1.00[JPT][hapmap] |
| rs11887 | 0.82[CHB][hapmap];1.00[JPT][hapmap] |
| rs2084408 | 0.82[CHB][hapmap] |
| rs2084409 | 0.82[CHB][hapmap] |
| rs35296872 | 0.83[CHB][hapmap];0.87[JPT][hapmap] |
| rs4893113 | 0.80[JPT][hapmap] |
| rs4898358 | 0.82[CHB][hapmap] |
| rs4898408 | 0.92[CHB][hapmap] |
| rs4898413 | 0.83[CHB][hapmap] |
| rs496740 | 0.80[JPT][hapmap] |
| rs499669 | 0.82[CHB][hapmap];1.00[JPT][hapmap] |
| rs5945287 | 0.82[CHB][hapmap] |
| rs5945289 | 0.82[CHB][hapmap] |
| rs5945300 | 0.82[CHB][hapmap] |
| rs5945301 | 0.82[CHB][hapmap] |
| rs5983697 | 0.83[CHB][hapmap] |
| rs5986908 | 0.82[CHB][hapmap] |
| rs5987087 | 0.82[CHB][hapmap] |
| rs5987092 | 0.82[CHB][hapmap] |
| rs5987094 | 0.83[CHB][hapmap] |
| rs6567813 | 0.82[CHB][hapmap] |
| rs6649617 | 0.82[CHB][hapmap] |
| rs7051718 | 0.83[CHB][hapmap] |
| rs7472099 | 0.82[CHB][hapmap] |
| rs7879736 | 0.83[CHB][hapmap] |
| rs895744 | 0.82[CHB][hapmap] |
| rs895745 | 0.82[CHB][hapmap] |
| rs965691 | 0.82[CHB][hapmap] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
