Variant report

Variant	rs59981119
Chromosome Location	chr8:64181897-64181898
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:64180743..64182661-chr8:64185697..64187507,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1435456	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16930253	0.89[EUR][1000 genomes]
rs16930256	0.85[EUR][1000 genomes]
rs2043521	0.96[EUR][1000 genomes]
rs2043524	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4130998	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4739072	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4739075	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4739076	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57046961	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58706850	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58941136	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60515592	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60700277	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6991229	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7017562	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72621443	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72621447	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72621448	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73686739	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7463246	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7824241	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7833772	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831342	chr8:64084331-64294941	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv1816645	chr8:64161544-64184282	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64178200-64182400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:64178400-64182400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:64178800-64192800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:64179200-64183000	Weak transcription	HSMM	muscle
5	chr8:64180800-64182000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr8:64181000-64182000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
7	chr8:64181200-64182400	Enhancers	Dnd41	blood
8	chr8:64181400-64182000	Enhancers	Primary hematopoietic stem cells	blood
9	chr8:64181800-64182000	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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