Variant report

Variant	rs6048167
Chromosome Location	chr20:22514392-22514393
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1055080	1.00[CEU][hapmap]
rs1203905	1.00[CEU][hapmap]
rs1203907	1.00[CEU][hapmap]
rs12481297	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2404167	0.94[EUR][1000 genomes]
rs4815116	0.94[EUR][1000 genomes]
rs4815117	0.94[EUR][1000 genomes]
rs59061776	0.80[AMR][1000 genomes]
rs6036137	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6036138	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6036140	0.88[EUR][1000 genomes]
rs6036141	0.88[EUR][1000 genomes]
rs6036142	0.88[EUR][1000 genomes]
rs6048153	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6048155	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6048160	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6048162	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6048163	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6048166	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6048168	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6048169	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6048171	0.88[EUR][1000 genomes]
rs6048172	0.88[EUR][1000 genomes]
rs6048206	1.00[CEU][hapmap]
rs6075923	0.90[EUR][1000 genomes]
rs6075924	0.83[EUR][1000 genomes]
rs6082733	0.94[EUR][1000 genomes]
rs6082734	0.89[EUR][1000 genomes]
rs6082735	0.94[EUR][1000 genomes]
rs6106520	0.88[EUR][1000 genomes]
rs73902850	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73902875	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8117447	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs945981	0.94[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22506800-22519000	Enhancers	HepG2	liver
2	chr20:22510600-22514600	Weak transcription	Pancreas	Pancrea
3	chr20:22510600-22521600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr20:22513000-22517000	Weak transcription	A549	lung
5	chr20:22514200-22515000	Enhancers	Stomach Mucosa	stomach
6	chr20:22514200-22515200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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