Variant report

Variant	rs6048735
Chromosome Location	chr20:23321518-23321519
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr20:23321273..23323325-chr20:23328933..23330875,2	K562	blood:
2	chr20:23308765..23311437-chr20:23321405..23324295,2	MCF-7	breast:
3	chr20:23038561..23039268-chr20:23321299..23322179,2	MCF-7	breast:
4	chr20:22670575..22671310-chr20:23321366..23321996,2	MCF-7	breast:
5	chr20:23031307..23031875-chr20:23320841..23321533,2	MCF-7	breast:
6	chr20:23226182..23226684-chr20:23321088..23321781,2	MCF-7	breast:

rs_ID	r²[population]
rs16985225	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs1891686	0.88[AMR][1000 genomes]
rs1891687	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs36010049	1.00[EUR][1000 genomes]
rs55939409	1.00[EUR][1000 genomes]
rs56122110	1.00[EUR][1000 genomes]
rs56830667	1.00[EUR][1000 genomes]
rs57226979	1.00[EUR][1000 genomes]
rs57368405	1.00[EUR][1000 genomes]
rs57456391	1.00[EUR][1000 genomes]
rs57782497	1.00[EUR][1000 genomes]
rs57842978	1.00[EUR][1000 genomes]
rs58592887	1.00[EUR][1000 genomes]
rs59499588	1.00[EUR][1000 genomes]
rs59893880	1.00[EUR][1000 genomes]
rs60127144	1.00[EUR][1000 genomes]
rs6036385	0.88[AMR][1000 genomes]
rs6036425	1.00[EUR][1000 genomes]
rs60394866	1.00[EUR][1000 genomes]
rs6048732	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs6048733	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs6048734	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs6106654	1.00[EUR][1000 genomes]
rs6106670	1.00[EUR][1000 genomes]
rs6114092	1.00[EUR][1000 genomes]
rs6114096	1.00[EUR][1000 genomes]
rs6114099	1.00[EUR][1000 genomes]
rs6114102	1.00[EUR][1000 genomes]
rs6114143	1.00[EUR][1000 genomes]
rs6114148	1.00[EUR][1000 genomes]
rs6114149	1.00[EUR][1000 genomes]
rs7263724	1.00[EUR][1000 genomes]
rs73901804	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73901806	1.00[EUR][1000 genomes]
rs73901807	1.00[EUR][1000 genomes]
rs73901808	1.00[EUR][1000 genomes]
rs73901810	1.00[EUR][1000 genomes]
rs73901812	1.00[EUR][1000 genomes]
rs73901814	1.00[EUR][1000 genomes]
rs73901818	1.00[EUR][1000 genomes]
rs73901819	1.00[EUR][1000 genomes]
rs73901821	1.00[EUR][1000 genomes]
rs73901823	1.00[EUR][1000 genomes]
rs73901825	1.00[EUR][1000 genomes]
rs73901827	1.00[EUR][1000 genomes]
rs73901857	1.00[EUR][1000 genomes]
rs73901858	1.00[EUR][1000 genomes]
rs73901861	1.00[EUR][1000 genomes]
rs73901862	1.00[EUR][1000 genomes]
rs73901863	1.00[EUR][1000 genomes]
rs73901872	1.00[EUR][1000 genomes]
rs73901874	1.00[EUR][1000 genomes]
rs73904259	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs73904260	1.00[EUR][1000 genomes]
rs73904261	1.00[EUR][1000 genomes]

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:23317200-23321600	Weak transcription	GM12878-XiMat	blood
2	chr20:23319600-23324600	Weak transcription	Fetal Heart	heart
3	chr20:23321000-23321800	Enhancers	Skeletal Muscle Male	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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