Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11822548	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11824642	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11827387	0.82[AFR][1000 genomes]
rs1806908	1.00[ASN][1000 genomes]
rs2015150	1.00[ASN][1000 genomes]
rs55777552	0.82[AFR][1000 genomes]
rs56262739	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56726683	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57189777	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59235070	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60743731	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72851647	1.00[ASN][1000 genomes]
rs72851665	1.00[ASN][1000 genomes]
rs72851667	1.00[ASN][1000 genomes]
rs72851668	1.00[ASN][1000 genomes]
rs72851686	1.00[ASN][1000 genomes]
rs72851689	1.00[ASN][1000 genomes]
rs72852806	1.00[ASN][1000 genomes]
rs72852812	1.00[ASN][1000 genomes]
rs72852835	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72852843	0.87[ASN][1000 genomes]
rs73403938	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10348200-10370200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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