The 2.0 version of rSNPBase

Variant report

Variant rs60630459
Chromosome Location chr6:118943894-118943895
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118912200-118966200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr6:118920800-118951200 Weak transcription HSMM muscle
3 chr6:118925000-118945000 Weak transcription Primary B cells from cord blood blood
4 chr6:118926600-118947000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:118927000-118965000 Weak transcription NHLF lung
6 chr6:118928000-118952000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr6:118928800-118951800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:118928800-118951800 Weak transcription Spleen Spleen
9 chr6:118929200-118947000 Weak transcription Thymus Thymus
10 chr6:118931600-118970400 Weak transcription NH-A brain
11 chr6:118933600-118946800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:118935600-118951400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr6:118937000-118947000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:118937200-118946200 Weak transcription Dnd41 blood
15 chr6:118937800-118947000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr6:118938800-118944600 Weak transcription Fetal Lung lung
17 chr6:118939000-118944200 Enhancers Skeletal Muscle Male skeletal muscle
18 chr6:118939200-118946000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:118939200-118946400 Enhancers Skeletal Muscle Female skeletal muscle
20 chr6:118940200-118947000 Weak transcription K562 blood
21 chr6:118940200-118966400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:118940400-118945000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:118940400-118945600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr6:118940400-118946200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr6:118940400-118946800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:118940400-118947200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr6:118940400-118947800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr6:118940400-118947800 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr6:118940400-118950200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:118940400-118951800 Weak transcription HMEC breast
31 chr6:118940400-118960600 Weak transcription Colon Smooth Muscle Colon
32 chr6:118940600-118945000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr6:118940600-118946800 Weak transcription Primary B cells from peripheral blood blood
34 chr6:118940600-118948600 Weak transcription Brain Anterior Caudate brain
35 chr6:118940600-118951400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:118940600-118955200 Weak transcription Brain Substantia Nigra brain
37 chr6:118940800-118944800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr6:118940800-118947000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:118940800-118947200 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr6:118940800-118951400 Weak transcription Left Ventricle heart
41 chr6:118940800-118953400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr6:118940800-118954800 Weak transcription Lung lung
43 chr6:118940800-118955000 Weak transcription Brain Hippocampus Middle brain
44 chr6:118940800-118960200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr6:118941000-118945000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr6:118941200-118945800 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr6:118941200-118946800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr6:118941600-118947200 Enhancers Psoas Muscle Psoas
49 chr6:118941800-118944800 ZNF genes & repeats Fetal Muscle Leg muscle
50 chr6:118941800-118946600 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015