Variant report

Variant rs6083088
Chromosome Location chr20:23343793-23343794
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23341400-23343800 Active TSS HUES64 Cell Line embryonic stem cell
2 chr20:23341600-23343800 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr20:23341600-23343800 Active TSS H9 Cell Line embryonic stem cell
4 chr20:23341800-23343800 Active TSS Lung lung
5 chr20:23342000-23343800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr20:23342000-23343800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr20:23342000-23343800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr20:23342000-23343800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr20:23342000-23343800 Active TSS iPS-18 Cell Line embryonic stem cell
10 chr20:23342000-23343800 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr20:23342000-23343800 Active TSS Aorta Aorta
12 chr20:23342000-23343800 Active TSS Brain Inferior Temporal Lobe brain
13 chr20:23342000-23343800 Active TSS Fetal Kidney kidney
14 chr20:23342000-23343800 Active TSS Left Ventricle heart
15 chr20:23342000-23343800 Active TSS Right Atrium heart
16 chr20:23342000-23343800 Active TSS HSMMtube muscle
17 chr20:23342000-23343800 Active TSS K562 blood
18 chr20:23342000-23344200 Active TSS HUES48 Cell Line embryonic stem cell
19 chr20:23342000-23344200 Active TSS Pancreatic Islets Pancreatic Islet
20 chr20:23342200-23343800 Active TSS GM12878-XiMat blood
21 chr20:23342400-23343800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr20:23342400-23352600 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr20:23343000-23343800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
24 chr20:23343000-23344000 Flanking Active TSS Primary B cells from cord blood blood
25 chr20:23343200-23343800 Flanking Active TSS Primary hematopoietic stem cells blood
26 chr20:23343200-23343800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
27 chr20:23343200-23343800 Flanking Active TSS Placenta Placenta
28 chr20:23343200-23343800 Flanking Active TSS Thymus Thymus
29 chr20:23343200-23344000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
30 chr20:23343200-23344000 Flanking Active TSS Primary B cells from peripheral blood blood
31 chr20:23343200-23344000 Flanking Active TSS Primary T cells fromperipheralblood blood
32 chr20:23343200-23344000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr20:23343200-23344000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr20:23343200-23344000 Flanking Active TSS Adipose Nuclei Adipose
35 chr20:23343200-23344000 Flanking Active TSS Spleen Spleen
36 chr20:23343200-23344200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
37 chr20:23343200-23344200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr20:23343200-23344200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr20:23343200-23344400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
40 chr20:23343200-23344400 Flanking Active TSS Fetal Muscle Trunk muscle
41 chr20:23343400-23343800 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
42 chr20:23343400-23343800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr20:23343400-23343800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
44 chr20:23343400-23343800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
45 chr20:23343400-23343800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
46 chr20:23343400-23343800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr20:23343400-23343800 Flanking Active TSS Fetal Stomach stomach
48 chr20:23343400-23343800 Flanking Active TSS Fetal Thymus thymus
49 chr20:23343400-23343800 Flanking Active TSS Placenta Amnion Placenta Amnion
50 chr20:23343400-23344000 Flanking Active TSS Primary monocytes fromperipheralblood blood

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