Variant report

Variant rs2275787
Chromosome Location chr20:23338486-23338487
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23336800-23339200 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr20:23336800-23339200 Active TSS H9 Cell Line embryonic stem cell
3 chr20:23336800-23339200 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr20:23336800-23339400 Active TSS HUES6 Cell Line embryonic stem cell
5 chr20:23337600-23338600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
6 chr20:23337600-23338600 Flanking Active TSS Dnd41 blood
7 chr20:23337600-23338600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr20:23337600-23338800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr20:23337600-23339200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr20:23337600-23339200 Active TSS HUES64 Cell Line embryonic stem cell
11 chr20:23337600-23339200 Active TSS Thymus Thymus
12 chr20:23337600-23339400 Active TSS NHLF lung
13 chr20:23337600-23339600 Active TSS Stomach Smooth Muscle stomach
14 chr20:23337800-23338600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr20:23337800-23338600 Flanking Active TSS Muscle Satellite Cultured Cells --
16 chr20:23337800-23339200 Active TSS HUES48 Cell Line embryonic stem cell
17 chr20:23337800-23339400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr20:23337800-23339600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
19 chr20:23337800-23339800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr20:23338000-23338600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
21 chr20:23338000-23338600 Flanking Active TSS Primary T cells fromperipheralblood blood
22 chr20:23338000-23338600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr20:23338000-23338600 Flanking Active TSS Fetal Muscle Leg muscle
24 chr20:23338000-23338600 Flanking Active TSS HMEC breast
25 chr20:23338000-23338800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr20:23338000-23338800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr20:23338000-23338800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr20:23338000-23338800 Flanking Active TSS Primary hematopoietic stem cells blood
29 chr20:23338000-23338800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
30 chr20:23338000-23339000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr20:23338000-23339200 Active TSS H1 Cell Line embryonic stem cell
32 chr20:23338000-23339200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr20:23338000-23339200 Active TSS iPS-15b Cell Line embryonic stem cell
34 chr20:23338000-23339200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
35 chr20:23338000-23339200 Active TSS Breast Myoepithelial Primary Cells Breast
36 chr20:23338000-23339200 Active TSS Brain Inferior Temporal Lobe brain
37 chr20:23338000-23339200 Active TSS Pancreatic Islets Pancreatic Islet
38 chr20:23338000-23339200 Active TSS A549 lung
39 chr20:23338000-23339200 Active TSS GM12878-XiMat blood
40 chr20:23338000-23339200 Active TSS Hela-S3 cervix
41 chr20:23338000-23339200 Active TSS HSMMtube muscle
42 chr20:23338000-23339200 Active TSS K562 blood
43 chr20:23338000-23339200 Active TSS NHDF-Ad bronchial
44 chr20:23338000-23339400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
45 chr20:23338000-23339400 Active TSS Fetal Intestine Large intestine
46 chr20:23338000-23339400 Active TSS Fetal Intestine Small intestine
47 chr20:23338000-23339400 Active TSS Psoas Muscle Psoas
48 chr20:23338000-23339600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr20:23338000-23339600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr20:23338200-23338600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood

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