Variant report

Variant rs4815199
Chromosome Location chr20:23347169-23347170
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23342400-23352600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr20:23344000-23347600 Enhancers Primary T cells fromperipheralblood blood
3 chr20:23344000-23392600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr20:23344400-23347200 Genic enhancers Dnd41 blood
5 chr20:23344400-23347800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr20:23344400-23349200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr20:23344400-23350200 Weak transcription Fetal Kidney kidney
8 chr20:23344600-23354200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr20:23344800-23347800 Genic enhancers Brain Inferior Temporal Lobe brain
10 chr20:23344800-23347800 Strong transcription A549 lung
11 chr20:23344800-23348800 Genic enhancers Skeletal Muscle Female skeletal muscle
12 chr20:23344800-23362400 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr20:23345000-23348200 Genic enhancers Cortex derived primary cultured neurospheres brain
14 chr20:23345000-23349600 Genic enhancers HepG2 liver
15 chr20:23345000-23361800 Strong transcription Fetal Thymus thymus
16 chr20:23345000-23362000 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr20:23345000-23362600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr20:23345200-23348200 Strong transcription Fetal Muscle Trunk muscle
19 chr20:23345400-23347200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr20:23345400-23347600 Strong transcription HSMMtube muscle
21 chr20:23345600-23347200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr20:23345800-23347600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr20:23345800-23348400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr20:23346000-23347400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr20:23346000-23347800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr20:23346000-23347800 Genic enhancers Primary B cells from peripheral blood blood
27 chr20:23346000-23348200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
28 chr20:23346200-23347200 Genic enhancers Fetal Lung lung
29 chr20:23346200-23347200 Weak transcription HSMM muscle
30 chr20:23346200-23347600 Genic enhancers Adipose Nuclei Adipose
31 chr20:23346200-23347600 Genic enhancers Stomach Smooth Muscle stomach
32 chr20:23346200-23347800 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr20:23346200-23347800 Genic enhancers Brain Cingulate Gyrus brain
34 chr20:23346200-23348000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr20:23346200-23348400 Genic enhancers Duodenum Smooth Muscle Duodenum
36 chr20:23346200-23348800 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr20:23346200-23349400 Genic enhancers HMEC breast
38 chr20:23346400-23347200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr20:23346400-23347200 Genic enhancers Sigmoid Colon Sigmoid Colon
40 chr20:23346400-23347400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr20:23346400-23347600 Genic enhancers Breast Myoepithelial Primary Cells Breast
42 chr20:23346400-23347600 Genic enhancers Primary T cells from cord blood blood
43 chr20:23346400-23347600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
44 chr20:23346400-23347800 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr20:23346400-23347800 Enhancers Primary neutrophils fromperipheralblood blood
46 chr20:23346400-23347800 Enhancers Primary B cells from cord blood blood
47 chr20:23346400-23347800 Genic enhancers Primary hematopoietic stem cells blood
48 chr20:23346400-23347800 Enhancers Duodenum Mucosa Duodenum
49 chr20:23346400-23348000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr20:23346400-23348000 Enhancers Primary T helper naive cells from peripheral blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links