The 2.0 version of rSNPBase

Variant report

Variant rs61011103
Chromosome Location chr15:56336361-56336362
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56330400-56336400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:56330800-56336400 Enhancers Fetal Intestine Large intestine
3 chr15:56330800-56337400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr15:56331400-56337800 Enhancers HMEC breast
5 chr15:56332200-56336400 Enhancers Placenta Placenta
6 chr15:56333400-56337200 Weak transcription Muscle Satellite Cultured Cells --
7 chr15:56333400-56342200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr15:56334000-56336600 Enhancers Primary T helper cells fromperipheralblood blood
9 chr15:56334000-56337200 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr15:56334000-56337400 Enhancers Primary T helper naive cells fromperipheralblood blood
11 chr15:56334200-56336600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr15:56334400-56337800 Enhancers Placenta Amnion Placenta Amnion
13 chr15:56335000-56342200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:56335200-56336400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
15 chr15:56335200-56336400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr15:56335200-56336600 Weak transcription HUVEC blood vessel
17 chr15:56335200-56336800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr15:56335200-56337800 Enhancers Hela-S3 cervix
19 chr15:56335400-56336400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr15:56335400-56337400 Enhancers Primary T helper cells PMA-I stimulated --
21 chr15:56335400-56339800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr15:56335400-56339800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr15:56335400-56341400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr15:56335600-56336400 ZNF genes & repeats GM12878-XiMat blood
25 chr15:56335600-56336400 Flanking Active TSS HepG2 liver
26 chr15:56335600-56336800 Weak transcription A549 lung
27 chr15:56335600-56337200 Weak transcription H9 Cell Line embryonic stem cell
28 chr15:56335800-56336400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr15:56335800-56336400 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr15:56335800-56336400 Flanking Active TSS Dnd41 blood
31 chr15:56335800-56336400 Active TSS Osteobl bone
32 chr15:56335800-56336600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr15:56335800-56336800 Weak transcription NHEK skin
34 chr15:56336000-56336400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr15:56336000-56336400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr15:56336000-56336400 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr15:56336000-56337000 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr15:56336200-56336400 Flanking Active TSS Primary T cells from cord blood blood
39 chr15:56336200-56336400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
40 chr15:56336200-56336600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
41 chr15:56336200-56337400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr15:56336200-56339400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015