The 2.0 version of rSNPBase

Variant report

Variant rs73424808
Chromosome Location chr15:56335584-56335585
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56330400-56336400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:56330800-56336400 Enhancers Fetal Intestine Large intestine
3 chr15:56330800-56337400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr15:56331000-56336200 Enhancers Fetal Intestine Small intestine
5 chr15:56331400-56335800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr15:56331400-56337800 Enhancers HMEC breast
7 chr15:56332200-56336400 Enhancers Placenta Placenta
8 chr15:56332800-56335800 Enhancers NHEK skin
9 chr15:56333200-56335600 Enhancers A549 lung
10 chr15:56333400-56335800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:56333400-56336000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr15:56333400-56336000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr15:56333400-56337200 Weak transcription Muscle Satellite Cultured Cells --
14 chr15:56333400-56342200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:56334000-56335800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr15:56334000-56336600 Enhancers Primary T helper cells fromperipheralblood blood
17 chr15:56334000-56337200 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr15:56334000-56337400 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr15:56334200-56336000 Enhancers Primary T cells fromperipheralblood blood
20 chr15:56334200-56336200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr15:56334200-56336600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr15:56334400-56337800 Enhancers Placenta Amnion Placenta Amnion
23 chr15:56334600-56335600 Enhancers HUES6 Cell Line embryonic stem cell
24 chr15:56334600-56335800 Enhancers HUES64 Cell Line embryonic stem cell
25 chr15:56334600-56336200 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr15:56334800-56335800 Enhancers Fetal Thymus thymus
27 chr15:56334800-56336000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
28 chr15:56334800-56336000 Enhancers Thymus Thymus
29 chr15:56335000-56335600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr15:56335000-56335800 Flanking Active TSS Primary T cells from cord blood blood
31 chr15:56335000-56335800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr15:56335000-56336000 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr15:56335000-56336200 Enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr15:56335000-56342200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr15:56335200-56335600 Enhancers H9 Cell Line embryonic stem cell
36 chr15:56335200-56335600 Enhancers HepG2 liver
37 chr15:56335200-56336000 Enhancers H1 Cell Line embryonic stem cell
38 chr15:56335200-56336000 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr15:56335200-56336400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
40 chr15:56335200-56336400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr15:56335200-56336600 Weak transcription HUVEC blood vessel
42 chr15:56335200-56336800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr15:56335200-56337800 Enhancers Hela-S3 cervix
44 chr15:56335400-56335600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr15:56335400-56335600 Weak transcription GM12878-XiMat blood
46 chr15:56335400-56335800 Active TSS Primary T regulatory cells fromperipheralblood blood
47 chr15:56335400-56335800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
48 chr15:56335400-56335800 Enhancers Dnd41 blood
49 chr15:56335400-56335800 Flanking Active TSS Osteobl bone
50 chr15:56335400-56336000 Enhancers HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015