Variant report

Variant	rs61571778
Chromosome Location	chr8:66910068-66910069
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10090644	1.00[EUR][1000 genomes]
rs16932400	1.00[EUR][1000 genomes]
rs2357573	1.00[EUR][1000 genomes]
rs55658547	1.00[EUR][1000 genomes]
rs55947988	1.00[EUR][1000 genomes]
rs56158968	1.00[EUR][1000 genomes]
rs56316549	1.00[EUR][1000 genomes]
rs56338345	1.00[EUR][1000 genomes]
rs56781848	1.00[EUR][1000 genomes]
rs57028955	1.00[EUR][1000 genomes]
rs57400902	1.00[EUR][1000 genomes]
rs57598287	1.00[EUR][1000 genomes]
rs58772235	1.00[EUR][1000 genomes]
rs58852265	1.00[EUR][1000 genomes]
rs58975338	1.00[EUR][1000 genomes]
rs59084420	1.00[EUR][1000 genomes]
rs59461929	1.00[EUR][1000 genomes]
rs59658032	1.00[EUR][1000 genomes]
rs59865117	1.00[EUR][1000 genomes]
rs59967440	1.00[EUR][1000 genomes]
rs60088935	1.00[EUR][1000 genomes]
rs60229346	1.00[EUR][1000 genomes]
rs60706814	1.00[EUR][1000 genomes]
rs6472243	1.00[EUR][1000 genomes]
rs7001194	1.00[EUR][1000 genomes]
rs73691210	1.00[EUR][1000 genomes]
rs73691221	1.00[EUR][1000 genomes]
rs73691248	1.00[EUR][1000 genomes]
rs73691253	1.00[EUR][1000 genomes]
rs73691255	1.00[EUR][1000 genomes]
rs73691258	1.00[EUR][1000 genomes]
rs73691260	1.00[EUR][1000 genomes]
rs73693441	1.00[EUR][1000 genomes]
rs7814366	1.00[EUR][1000 genomes]
rs7834695	1.00[EUR][1000 genomes]
rs7839572	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66905000-66910200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr8:66905000-66910200	Weak transcription	Thymus	Thymus
3	chr8:66909800-66915400	Enhancers	Primary T cells fromperipheralblood	blood
4	chr8:66909800-66915400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr8:66910000-66911000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr8:66910000-66912000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
7	chr8:66910000-66912200	Enhancers	Primary T killer memory cells from peripheral blood	blood
8	chr8:66910000-66914000	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr8:66910000-66915800	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr8:66910000-66916200	Enhancers	Primary T helper naive cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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