Variant report

Variant	rs73691248
Chromosome Location	chr8:66893822-66893823
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs16932400	1.00[EUR][1000 genomes]
rs2357573	1.00[EUR][1000 genomes]
rs55658547	1.00[EUR][1000 genomes]
rs55947988	1.00[EUR][1000 genomes]
rs56158968	1.00[EUR][1000 genomes]
rs56316549	1.00[EUR][1000 genomes]
rs56338345	1.00[EUR][1000 genomes]
rs56781848	1.00[EUR][1000 genomes]
rs57028955	1.00[EUR][1000 genomes]
rs57400902	1.00[EUR][1000 genomes]
rs57598287	1.00[EUR][1000 genomes]
rs58772235	1.00[EUR][1000 genomes]
rs58852265	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58975338	1.00[EUR][1000 genomes]
rs59084420	1.00[EUR][1000 genomes]
rs59461929	1.00[EUR][1000 genomes]
rs59658032	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59865117	1.00[EUR][1000 genomes]
rs59967440	1.00[EUR][1000 genomes]
rs60088935	1.00[EUR][1000 genomes]
rs60229346	1.00[EUR][1000 genomes]
rs60706814	1.00[EUR][1000 genomes]
rs61571778	1.00[EUR][1000 genomes]
rs6472243	1.00[EUR][1000 genomes]
rs7001194	1.00[EUR][1000 genomes]
rs73691210	1.00[EUR][1000 genomes]
rs73691221	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73691253	1.00[EUR][1000 genomes]
rs73691255	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73691258	1.00[EUR][1000 genomes]
rs73691260	1.00[EUR][1000 genomes]
rs73693441	1.00[EUR][1000 genomes]
rs7814366	1.00[EUR][1000 genomes]
rs7834695	1.00[EUR][1000 genomes]
rs7839572	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv1023239	chr8:66775321-66904124	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66890600-66896800	Enhancers	Primary B cells from peripheral blood	blood
2	chr8:66892000-66896800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:66892200-66894600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr8:66892400-66896000	Weak transcription	Right Atrium	heart
5	chr8:66892800-66895400	Enhancers	Fetal Intestine Large	intestine
6	chr8:66893200-66894800	Enhancers	Fetal Thymus	thymus
7	chr8:66893400-66894000	Enhancers	Esophagus	oesophagus
8	chr8:66893400-66894200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
9	chr8:66893400-66894400	Flanking Active TSS	GM12878-XiMat	blood
10	chr8:66893400-66895000	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr8:66893400-66895000	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr8:66893400-66895000	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr8:66893400-66895400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr8:66893400-66895600	Enhancers	Fetal Intestine Small	intestine
15	chr8:66893600-66894000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr8:66893600-66894000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
17	chr8:66893600-66894000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
18	chr8:66893600-66894000	Enhancers	Sigmoid Colon	Sigmoid Colon
19	chr8:66893600-66894200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr8:66893600-66894400	Enhancers	Primary T cells fromperipheralblood	blood
21	chr8:66893600-66894600	Enhancers	Primary T killer memory cells from peripheral blood	blood
22	chr8:66893600-66894600	Enhancers	Duodenum Mucosa	Duodenum
23	chr8:66893600-66894800	Enhancers	Primary T cells from cord blood	blood
24	chr8:66893600-66894800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
25	chr8:66893600-66894800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr8:66893600-66894800	Enhancers	Thymus	Thymus
27	chr8:66893600-66895200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
28	chr8:66893600-66895400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr8:66893600-66895400	Enhancers	HepG2	liver
30	chr8:66893600-66895600	Enhancers	Primary hematopoietic stem cells	blood
31	chr8:66893800-66894000	Flanking Active TSS	Primary B cells from cord blood	blood
32	chr8:66893800-66894000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr8:66893800-66894000	Enhancers	Small Intestine	intestine
34	chr8:66893800-66894800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
35	chr8:66893800-66894800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr8:66893800-66901800	Weak transcription	Spleen	Spleen

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