The 2.0 version of rSNPBase

Variant report

Variant rs61889551
Chromosome Location chr11:67039688-67039689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67034400-67041400 Flanking Active TSS Primary B cells from cord blood blood
2 chr11:67034600-67040800 Transcr. at gene 5' and 3' Dnd41 blood
3 chr11:67034600-67041400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
4 chr11:67034800-67039800 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
5 chr11:67034800-67041000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr11:67035000-67040400 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
7 chr11:67035000-67040400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
8 chr11:67035000-67040400 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
9 chr11:67035000-67040400 Transcr. at gene 5' and 3' Thymus Thymus
10 chr11:67035000-67040800 Weak transcription Ovary ovary
11 chr11:67035200-67039800 Transcr. at gene 5' and 3' GM12878-XiMat blood
12 chr11:67035200-67040400 Transcr. at gene 5' and 3' Fetal Thymus thymus
13 chr11:67035400-67040800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
14 chr11:67035400-67044400 Weak transcription A549 lung
15 chr11:67035600-67040000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
16 chr11:67035600-67041200 Genic enhancers Gastric stomach
17 chr11:67035600-67041400 Enhancers Fetal Heart heart
18 chr11:67035600-67041600 Flanking Active TSS Primary T cells from cord blood blood
19 chr11:67035600-67046400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
20 chr11:67035800-67044600 Enhancers Left Ventricle heart
21 chr11:67036000-67040400 Genic enhancers Breast Myoepithelial Primary Cells Breast
22 chr11:67036000-67041000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr11:67036200-67040600 Weak transcription HMEC breast
24 chr11:67036800-67041000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
25 chr11:67037000-67039800 Enhancers H1 Cell Line embryonic stem cell
26 chr11:67037000-67039800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
27 chr11:67037000-67041400 Enhancers Osteobl bone
28 chr11:67037200-67039800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr11:67037200-67040600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
30 chr11:67037200-67041800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr11:67037200-67055800 Genic enhancers Spleen Spleen
32 chr11:67037400-67040400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
33 chr11:67037400-67040600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:67037600-67039800 Weak transcription HSMMtube muscle
35 chr11:67037600-67040000 Weak transcription Hela-S3 cervix
36 chr11:67037600-67040800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:67037600-67042600 Enhancers NHDF-Ad bronchial
38 chr11:67037800-67041000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
39 chr11:67037800-67044600 Enhancers Liver Liver
40 chr11:67037800-67046200 Enhancers Stomach Mucosa stomach
41 chr11:67037800-67046800 Weak transcription Aorta Aorta
42 chr11:67038000-67040000 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr11:67038000-67041000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:67038200-67039800 Enhancers Right Ventricle heart
45 chr11:67038200-67040400 Genic enhancers Fetal Intestine Large intestine
46 chr11:67038200-67040400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
47 chr11:67038200-67040800 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
48 chr11:67038200-67041600 Enhancers Muscle Satellite Cultured Cells --
49 chr11:67038200-67042800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr11:67038200-67055200 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015